Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23497 | 70714;70715;70716 | chr2:178575643;178575642;178575641 | chr2:179440370;179440369;179440368 |
N2AB | 21856 | 65791;65792;65793 | chr2:178575643;178575642;178575641 | chr2:179440370;179440369;179440368 |
N2A | 20929 | 63010;63011;63012 | chr2:178575643;178575642;178575641 | chr2:179440370;179440369;179440368 |
N2B | 14432 | 43519;43520;43521 | chr2:178575643;178575642;178575641 | chr2:179440370;179440369;179440368 |
Novex-1 | 14557 | 43894;43895;43896 | chr2:178575643;178575642;178575641 | chr2:179440370;179440369;179440368 |
Novex-2 | 14624 | 44095;44096;44097 | chr2:178575643;178575642;178575641 | chr2:179440370;179440369;179440368 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.966 | N | 0.575 | 0.351 | 0.409665357357 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85915E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.07 | likely_benign | 0.0698 | benign | -0.673 | Destabilizing | 0.454 | N | 0.367 | neutral | N | 0.476145406 | None | None | N |
T/C | 0.3045 | likely_benign | 0.3079 | benign | -0.387 | Destabilizing | 0.998 | D | 0.545 | neutral | None | None | None | None | N |
T/D | 0.267 | likely_benign | 0.2682 | benign | 0.146 | Stabilizing | 0.842 | D | 0.486 | neutral | None | None | None | None | N |
T/E | 0.2242 | likely_benign | 0.2265 | benign | 0.104 | Stabilizing | 0.842 | D | 0.463 | neutral | None | None | None | None | N |
T/F | 0.1826 | likely_benign | 0.1918 | benign | -0.981 | Destabilizing | 0.991 | D | 0.624 | neutral | None | None | None | None | N |
T/G | 0.1502 | likely_benign | 0.1472 | benign | -0.864 | Destabilizing | 0.842 | D | 0.522 | neutral | None | None | None | None | N |
T/H | 0.1988 | likely_benign | 0.1934 | benign | -1.104 | Destabilizing | 0.998 | D | 0.61 | neutral | None | None | None | None | N |
T/I | 0.1144 | likely_benign | 0.1221 | benign | -0.276 | Destabilizing | 0.966 | D | 0.575 | neutral | N | 0.488933743 | None | None | N |
T/K | 0.1999 | likely_benign | 0.193 | benign | -0.545 | Destabilizing | 0.842 | D | 0.475 | neutral | None | None | None | None | N |
T/L | 0.0738 | likely_benign | 0.0753 | benign | -0.276 | Destabilizing | 0.842 | D | 0.469 | neutral | None | None | None | None | N |
T/M | 0.0799 | likely_benign | 0.0765 | benign | -0.016 | Destabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | N |
T/N | 0.0937 | likely_benign | 0.092 | benign | -0.379 | Destabilizing | 0.801 | D | 0.433 | neutral | N | 0.468548082 | None | None | N |
T/P | 0.0754 | likely_benign | 0.0778 | benign | -0.378 | Destabilizing | 0.002 | N | 0.241 | neutral | N | 0.50524572 | None | None | N |
T/Q | 0.1885 | likely_benign | 0.1786 | benign | -0.579 | Destabilizing | 0.974 | D | 0.576 | neutral | None | None | None | None | N |
T/R | 0.1904 | likely_benign | 0.1895 | benign | -0.263 | Destabilizing | 0.974 | D | 0.579 | neutral | None | None | None | None | N |
T/S | 0.0803 | likely_benign | 0.0776 | benign | -0.669 | Destabilizing | 0.136 | N | 0.216 | neutral | N | 0.450083083 | None | None | N |
T/V | 0.098 | likely_benign | 0.1012 | benign | -0.378 | Destabilizing | 0.915 | D | 0.377 | neutral | None | None | None | None | N |
T/W | 0.4871 | ambiguous | 0.4907 | ambiguous | -0.92 | Destabilizing | 0.998 | D | 0.656 | neutral | None | None | None | None | N |
T/Y | 0.2307 | likely_benign | 0.2393 | benign | -0.676 | Destabilizing | 0.991 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.