Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23504 | 70735;70736;70737 | chr2:178575622;178575621;178575620 | chr2:179440349;179440348;179440347 |
N2AB | 21863 | 65812;65813;65814 | chr2:178575622;178575621;178575620 | chr2:179440349;179440348;179440347 |
N2A | 20936 | 63031;63032;63033 | chr2:178575622;178575621;178575620 | chr2:179440349;179440348;179440347 |
N2B | 14439 | 43540;43541;43542 | chr2:178575622;178575621;178575620 | chr2:179440349;179440348;179440347 |
Novex-1 | 14564 | 43915;43916;43917 | chr2:178575622;178575621;178575620 | chr2:179440349;179440348;179440347 |
Novex-2 | 14631 | 44116;44117;44118 | chr2:178575622;178575621;178575620 | chr2:179440349;179440348;179440347 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.109 | 0.083 | 0.240491677333 | gnomAD-4.0.0 | 6.84291E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99557E-07 | 0 | 0 |
E/Q | rs1362847983 | -0.858 | 0.002 | N | 0.199 | 0.116 | 0.275641507738 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 9.19118E-04 |
E/Q | rs1362847983 | -0.858 | 0.002 | N | 0.199 | 0.116 | 0.275641507738 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs1362847983 | -0.858 | 0.002 | N | 0.199 | 0.116 | 0.275641507738 | gnomAD-4.0.0 | 5.07505E-06 | None | None | None | None | N | None | 0 | 6.15612E-05 | None | 0 | 0 | None | 0 | 0 | 3.61491E-06 | 0 | 3.40298E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1943 | likely_benign | 0.2083 | benign | -0.951 | Destabilizing | 0.117 | N | 0.443 | neutral | N | 0.498261032 | None | None | N |
E/C | 0.8175 | likely_pathogenic | 0.8235 | pathogenic | -0.568 | Destabilizing | 0.935 | D | 0.635 | neutral | None | None | None | None | N |
E/D | 0.1413 | likely_benign | 0.1845 | benign | -1.189 | Destabilizing | None | N | 0.109 | neutral | N | 0.502493416 | None | None | N |
E/F | 0.781 | likely_pathogenic | 0.8045 | pathogenic | -0.261 | Destabilizing | 0.235 | N | 0.591 | neutral | None | None | None | None | N |
E/G | 0.283 | likely_benign | 0.3149 | benign | -1.35 | Destabilizing | 0.117 | N | 0.516 | neutral | N | 0.517366868 | None | None | N |
E/H | 0.5587 | ambiguous | 0.5918 | pathogenic | -0.588 | Destabilizing | 0.38 | N | 0.517 | neutral | None | None | None | None | N |
E/I | 0.3956 | ambiguous | 0.4505 | ambiguous | 0.15 | Stabilizing | 0.555 | D | 0.612 | neutral | None | None | None | None | N |
E/K | 0.3272 | likely_benign | 0.3711 | ambiguous | -0.908 | Destabilizing | 0.062 | N | 0.388 | neutral | N | 0.496066089 | None | None | N |
E/L | 0.4354 | ambiguous | 0.4482 | ambiguous | 0.15 | Stabilizing | 0.149 | N | 0.565 | neutral | None | None | None | None | N |
E/M | 0.4939 | ambiguous | 0.5074 | ambiguous | 0.654 | Stabilizing | 0.824 | D | 0.597 | neutral | None | None | None | None | N |
E/N | 0.2916 | likely_benign | 0.352 | ambiguous | -1.368 | Destabilizing | 0.081 | N | 0.451 | neutral | None | None | None | None | N |
E/P | 0.5963 | likely_pathogenic | 0.6319 | pathogenic | -0.196 | Destabilizing | 0.555 | D | 0.565 | neutral | None | None | None | None | N |
E/Q | 0.1869 | likely_benign | 0.1896 | benign | -1.195 | Destabilizing | 0.002 | N | 0.199 | neutral | N | 0.463359025 | None | None | N |
E/R | 0.4526 | ambiguous | 0.4947 | ambiguous | -0.584 | Destabilizing | 0.235 | N | 0.479 | neutral | None | None | None | None | N |
E/S | 0.1912 | likely_benign | 0.2085 | benign | -1.738 | Destabilizing | 0.081 | N | 0.373 | neutral | None | None | None | None | N |
E/T | 0.2435 | likely_benign | 0.2672 | benign | -1.408 | Destabilizing | 0.149 | N | 0.519 | neutral | None | None | None | None | N |
E/V | 0.258 | likely_benign | 0.2908 | benign | -0.196 | Destabilizing | 0.117 | N | 0.571 | neutral | N | 0.500839977 | None | None | N |
E/W | 0.9251 | likely_pathogenic | 0.934 | pathogenic | -0.006 | Destabilizing | 0.935 | D | 0.609 | neutral | None | None | None | None | N |
E/Y | 0.6343 | likely_pathogenic | 0.6785 | pathogenic | -0.022 | Destabilizing | 0.002 | N | 0.299 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.