Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23506 | 70741;70742;70743 | chr2:178575616;178575615;178575614 | chr2:179440343;179440342;179440341 |
N2AB | 21865 | 65818;65819;65820 | chr2:178575616;178575615;178575614 | chr2:179440343;179440342;179440341 |
N2A | 20938 | 63037;63038;63039 | chr2:178575616;178575615;178575614 | chr2:179440343;179440342;179440341 |
N2B | 14441 | 43546;43547;43548 | chr2:178575616;178575615;178575614 | chr2:179440343;179440342;179440341 |
Novex-1 | 14566 | 43921;43922;43923 | chr2:178575616;178575615;178575614 | chr2:179440343;179440342;179440341 |
Novex-2 | 14633 | 44122;44123;44124 | chr2:178575616;178575615;178575614 | chr2:179440343;179440342;179440341 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs753350142 | -1.595 | 0.001 | N | 0.275 | 0.294 | 0.548654159409 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
F/L | rs753350142 | -1.595 | 0.001 | N | 0.275 | 0.294 | 0.548654159409 | gnomAD-4.0.0 | 1.59165E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85909E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8407 | likely_pathogenic | 0.882 | pathogenic | -2.852 | Highly Destabilizing | 0.345 | N | 0.592 | neutral | None | None | None | None | N |
F/C | 0.3834 | ambiguous | 0.3972 | ambiguous | -1.349 | Destabilizing | 0.987 | D | 0.647 | neutral | N | 0.498951679 | None | None | N |
F/D | 0.9533 | likely_pathogenic | 0.972 | pathogenic | -2.955 | Highly Destabilizing | 0.965 | D | 0.645 | neutral | None | None | None | None | N |
F/E | 0.9647 | likely_pathogenic | 0.9755 | pathogenic | -2.778 | Highly Destabilizing | 0.722 | D | 0.643 | neutral | None | None | None | None | N |
F/G | 0.9255 | likely_pathogenic | 0.9431 | pathogenic | -3.235 | Highly Destabilizing | 0.722 | D | 0.585 | neutral | None | None | None | None | N |
F/H | 0.5683 | likely_pathogenic | 0.6261 | pathogenic | -1.73 | Destabilizing | 0.818 | D | 0.59 | neutral | None | None | None | None | N |
F/I | 0.4525 | ambiguous | 0.5453 | ambiguous | -1.599 | Destabilizing | 0.166 | N | 0.558 | neutral | N | 0.466473901 | None | None | N |
F/K | 0.9405 | likely_pathogenic | 0.9551 | pathogenic | -1.668 | Destabilizing | 0.722 | D | 0.628 | neutral | None | None | None | None | N |
F/L | 0.8774 | likely_pathogenic | 0.9041 | pathogenic | -1.599 | Destabilizing | 0.001 | N | 0.275 | neutral | N | 0.478960408 | None | None | N |
F/M | 0.7089 | likely_pathogenic | 0.7501 | pathogenic | -1.211 | Destabilizing | 0.818 | D | 0.559 | neutral | None | None | None | None | N |
F/N | 0.774 | likely_pathogenic | 0.8364 | pathogenic | -2.022 | Highly Destabilizing | 0.901 | D | 0.646 | neutral | None | None | None | None | N |
F/P | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -2.027 | Highly Destabilizing | 0.965 | D | 0.648 | neutral | None | None | None | None | N |
F/Q | 0.8819 | likely_pathogenic | 0.9033 | pathogenic | -2.048 | Highly Destabilizing | 0.965 | D | 0.652 | neutral | None | None | None | None | N |
F/R | 0.844 | likely_pathogenic | 0.8744 | pathogenic | -1.141 | Destabilizing | 0.901 | D | 0.641 | neutral | None | None | None | None | N |
F/S | 0.6714 | likely_pathogenic | 0.7442 | pathogenic | -2.621 | Highly Destabilizing | 0.662 | D | 0.59 | neutral | N | 0.475880031 | None | None | N |
F/T | 0.7729 | likely_pathogenic | 0.8346 | pathogenic | -2.352 | Highly Destabilizing | 0.561 | D | 0.596 | neutral | None | None | None | None | N |
F/V | 0.4307 | ambiguous | 0.513 | ambiguous | -2.027 | Highly Destabilizing | 0.166 | N | 0.564 | neutral | N | 0.476034746 | None | None | N |
F/W | 0.5827 | likely_pathogenic | 0.6226 | pathogenic | -0.511 | Destabilizing | 0.901 | D | 0.595 | neutral | None | None | None | None | N |
F/Y | 0.079 | likely_benign | 0.0889 | benign | -0.869 | Destabilizing | None | N | 0.238 | neutral | N | 0.409908542 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.