Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23557 | 70894;70895;70896 | chr2:178575463;178575462;178575461 | chr2:179440190;179440189;179440188 |
N2AB | 21916 | 65971;65972;65973 | chr2:178575463;178575462;178575461 | chr2:179440190;179440189;179440188 |
N2A | 20989 | 63190;63191;63192 | chr2:178575463;178575462;178575461 | chr2:179440190;179440189;179440188 |
N2B | 14492 | 43699;43700;43701 | chr2:178575463;178575462;178575461 | chr2:179440190;179440189;179440188 |
Novex-1 | 14617 | 44074;44075;44076 | chr2:178575463;178575462;178575461 | chr2:179440190;179440189;179440188 |
Novex-2 | 14684 | 44275;44276;44277 | chr2:178575463;178575462;178575461 | chr2:179440190;179440189;179440188 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.029 | N | 0.247 | 0.113 | 0.0401082797425 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2221 | likely_benign | 0.2348 | benign | 0.049 | Stabilizing | 0.031 | N | 0.272 | neutral | None | None | None | None | I |
K/C | 0.599 | likely_pathogenic | 0.6115 | pathogenic | 0.069 | Stabilizing | 0.864 | D | 0.213 | neutral | None | None | None | None | I |
K/D | 0.4879 | ambiguous | 0.5065 | ambiguous | -0.061 | Destabilizing | None | N | 0.131 | neutral | None | None | None | None | I |
K/E | 0.1431 | likely_benign | 0.1536 | benign | -0.048 | Destabilizing | None | N | 0.075 | neutral | N | 0.407735028 | None | None | I |
K/F | 0.6938 | likely_pathogenic | 0.6994 | pathogenic | -0.064 | Destabilizing | 0.214 | N | 0.299 | neutral | None | None | None | None | I |
K/G | 0.3394 | likely_benign | 0.3439 | ambiguous | -0.169 | Destabilizing | 0.031 | N | 0.277 | neutral | None | None | None | None | I |
K/H | 0.3153 | likely_benign | 0.3223 | benign | -0.486 | Destabilizing | 0.356 | N | 0.257 | neutral | None | None | None | None | I |
K/I | 0.2277 | likely_benign | 0.2417 | benign | 0.556 | Stabilizing | 0.029 | N | 0.382 | neutral | N | 0.475154886 | None | None | I |
K/L | 0.2268 | likely_benign | 0.2385 | benign | 0.556 | Stabilizing | None | N | 0.149 | neutral | None | None | None | None | I |
K/M | 0.2097 | likely_benign | 0.22 | benign | 0.291 | Stabilizing | 0.214 | N | 0.258 | neutral | None | None | None | None | I |
K/N | 0.4084 | ambiguous | 0.4168 | ambiguous | 0.4 | Stabilizing | 0.029 | N | 0.247 | neutral | N | 0.48937219 | None | None | I |
K/P | 0.4885 | ambiguous | 0.4774 | ambiguous | 0.415 | Stabilizing | 0.136 | N | 0.343 | neutral | None | None | None | None | I |
K/Q | 0.1154 | likely_benign | 0.1192 | benign | 0.241 | Stabilizing | 0.029 | N | 0.281 | neutral | N | 0.500781262 | None | None | I |
K/R | 0.0767 | likely_benign | 0.0773 | benign | -0.029 | Destabilizing | None | N | 0.131 | neutral | N | 0.481502068 | None | None | I |
K/S | 0.3235 | likely_benign | 0.3298 | benign | -0.004 | Destabilizing | 0.031 | N | 0.252 | neutral | None | None | None | None | I |
K/T | 0.1589 | likely_benign | 0.167 | benign | 0.15 | Stabilizing | 0.024 | N | 0.28 | neutral | N | 0.472978586 | None | None | I |
K/V | 0.1874 | likely_benign | 0.2049 | benign | 0.415 | Stabilizing | 0.016 | N | 0.269 | neutral | None | None | None | None | I |
K/W | 0.7098 | likely_pathogenic | 0.7039 | pathogenic | -0.103 | Destabilizing | 0.864 | D | 0.211 | neutral | None | None | None | None | I |
K/Y | 0.5904 | likely_pathogenic | 0.5933 | pathogenic | 0.223 | Stabilizing | 0.356 | N | 0.3 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.