Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23574 | 70945;70946;70947 | chr2:178575412;178575411;178575410 | chr2:179440139;179440138;179440137 |
N2AB | 21933 | 66022;66023;66024 | chr2:178575412;178575411;178575410 | chr2:179440139;179440138;179440137 |
N2A | 21006 | 63241;63242;63243 | chr2:178575412;178575411;178575410 | chr2:179440139;179440138;179440137 |
N2B | 14509 | 43750;43751;43752 | chr2:178575412;178575411;178575410 | chr2:179440139;179440138;179440137 |
Novex-1 | 14634 | 44125;44126;44127 | chr2:178575412;178575411;178575410 | chr2:179440139;179440138;179440137 |
Novex-2 | 14701 | 44326;44327;44328 | chr2:178575412;178575411;178575410 | chr2:179440139;179440138;179440137 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs781090352 | 0.192 | 0.569 | N | 0.514 | 0.173 | 0.307016933798 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs781090352 | 0.192 | 0.569 | N | 0.514 | 0.173 | 0.307016933798 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4394 | ambiguous | 0.4125 | ambiguous | -0.004 | Destabilizing | 0.904 | D | 0.585 | neutral | None | None | None | None | N |
K/C | 0.8012 | likely_pathogenic | 0.7904 | pathogenic | -0.252 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/D | 0.7611 | likely_pathogenic | 0.7291 | pathogenic | 0.056 | Stabilizing | 0.825 | D | 0.57 | neutral | None | None | None | None | N |
K/E | 0.3086 | likely_benign | 0.2766 | benign | 0.074 | Stabilizing | 0.007 | N | 0.333 | neutral | N | 0.472554511 | None | None | N |
K/F | 0.8793 | likely_pathogenic | 0.8642 | pathogenic | -0.129 | Destabilizing | 0.929 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/G | 0.6389 | likely_pathogenic | 0.6139 | pathogenic | -0.226 | Destabilizing | 0.971 | D | 0.585 | neutral | None | None | None | None | N |
K/H | 0.4337 | ambiguous | 0.4168 | ambiguous | -0.483 | Destabilizing | 0.991 | D | 0.57 | neutral | None | None | None | None | N |
K/I | 0.4732 | ambiguous | 0.426 | ambiguous | 0.506 | Stabilizing | 0.269 | N | 0.684 | prob.neutral | N | 0.475523068 | None | None | N |
K/L | 0.502 | ambiguous | 0.4713 | ambiguous | 0.506 | Stabilizing | 0.122 | N | 0.599 | neutral | None | None | None | None | N |
K/M | 0.3507 | ambiguous | 0.3243 | benign | 0.244 | Stabilizing | 0.189 | N | 0.546 | neutral | None | None | None | None | N |
K/N | 0.5994 | likely_pathogenic | 0.5448 | ambiguous | 0.148 | Stabilizing | 0.962 | D | 0.519 | neutral | N | 0.479739803 | None | None | N |
K/P | 0.7132 | likely_pathogenic | 0.6846 | pathogenic | 0.365 | Stabilizing | 0.985 | D | 0.583 | neutral | None | None | None | None | N |
K/Q | 0.19 | likely_benign | 0.1821 | benign | -0.015 | Destabilizing | 0.602 | D | 0.531 | neutral | N | 0.48710641 | None | None | N |
K/R | 0.0912 | likely_benign | 0.0906 | benign | -0.106 | Destabilizing | 0.569 | D | 0.514 | neutral | N | 0.479232824 | None | None | N |
K/S | 0.5901 | likely_pathogenic | 0.551 | ambiguous | -0.349 | Destabilizing | 0.904 | D | 0.537 | neutral | None | None | None | None | N |
K/T | 0.3488 | ambiguous | 0.3093 | benign | -0.177 | Destabilizing | 0.882 | D | 0.553 | neutral | N | 0.501010549 | None | None | N |
K/V | 0.4402 | ambiguous | 0.4051 | ambiguous | 0.365 | Stabilizing | 0.155 | N | 0.591 | neutral | None | None | None | None | N |
K/W | 0.8547 | likely_pathogenic | 0.8426 | pathogenic | -0.128 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/Y | 0.7788 | likely_pathogenic | 0.7514 | pathogenic | 0.214 | Stabilizing | 0.905 | D | 0.673 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.