Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23576 | 70951;70952;70953 | chr2:178575406;178575405;178575404 | chr2:179440133;179440132;179440131 |
N2AB | 21935 | 66028;66029;66030 | chr2:178575406;178575405;178575404 | chr2:179440133;179440132;179440131 |
N2A | 21008 | 63247;63248;63249 | chr2:178575406;178575405;178575404 | chr2:179440133;179440132;179440131 |
N2B | 14511 | 43756;43757;43758 | chr2:178575406;178575405;178575404 | chr2:179440133;179440132;179440131 |
Novex-1 | 14636 | 44131;44132;44133 | chr2:178575406;178575405;178575404 | chr2:179440133;179440132;179440131 |
Novex-2 | 14703 | 44332;44333;44334 | chr2:178575406;178575405;178575404 | chr2:179440133;179440132;179440131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.995 | N | 0.525 | 0.489 | 0.527557778142 | gnomAD-4.0.0 | 1.59174E-06 | None | None | None | None | N | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0951 | likely_benign | 0.0928 | benign | -0.334 | Destabilizing | 0.002 | N | 0.273 | neutral | N | 0.466733976 | None | None | N |
S/C | 0.1252 | likely_benign | 0.1171 | benign | -0.261 | Destabilizing | 0.995 | D | 0.457 | neutral | D | 0.525454513 | None | None | N |
S/D | 0.5082 | ambiguous | 0.4461 | ambiguous | -0.081 | Destabilizing | 0.914 | D | 0.357 | neutral | None | None | None | None | N |
S/E | 0.5802 | likely_pathogenic | 0.5131 | ambiguous | -0.191 | Destabilizing | 0.937 | D | 0.356 | neutral | None | None | None | None | N |
S/F | 0.2572 | likely_benign | 0.2307 | benign | -0.982 | Destabilizing | 0.995 | D | 0.525 | neutral | N | 0.495740463 | None | None | N |
S/G | 0.1102 | likely_benign | 0.1008 | benign | -0.413 | Destabilizing | 0.908 | D | 0.387 | neutral | None | None | None | None | N |
S/H | 0.4256 | ambiguous | 0.3679 | ambiguous | -0.924 | Destabilizing | 1.0 | D | 0.45 | neutral | None | None | None | None | N |
S/I | 0.2416 | likely_benign | 0.1973 | benign | -0.255 | Destabilizing | 0.993 | D | 0.485 | neutral | None | None | None | None | N |
S/K | 0.6752 | likely_pathogenic | 0.6087 | pathogenic | -0.487 | Destabilizing | 0.975 | D | 0.362 | neutral | None | None | None | None | N |
S/L | 0.097 | likely_benign | 0.0911 | benign | -0.255 | Destabilizing | 0.952 | D | 0.392 | neutral | None | None | None | None | N |
S/M | 0.1752 | likely_benign | 0.166 | benign | 0.044 | Stabilizing | 1.0 | D | 0.441 | neutral | None | None | None | None | N |
S/N | 0.1808 | likely_benign | 0.149 | benign | -0.163 | Destabilizing | 0.554 | D | 0.41 | neutral | None | None | None | None | N |
S/P | 0.7504 | likely_pathogenic | 0.7024 | pathogenic | -0.255 | Destabilizing | 0.983 | D | 0.409 | neutral | N | 0.466747202 | None | None | N |
S/Q | 0.5327 | ambiguous | 0.4756 | ambiguous | -0.475 | Destabilizing | 0.996 | D | 0.389 | neutral | None | None | None | None | N |
S/R | 0.6405 | likely_pathogenic | 0.5627 | ambiguous | -0.228 | Destabilizing | 0.996 | D | 0.413 | neutral | None | None | None | None | N |
S/T | 0.0741 | likely_benign | 0.0732 | benign | -0.278 | Destabilizing | 0.005 | N | 0.233 | neutral | N | 0.461721442 | None | None | N |
S/V | 0.2056 | likely_benign | 0.1827 | benign | -0.255 | Destabilizing | 0.881 | D | 0.416 | neutral | None | None | None | None | N |
S/W | 0.3955 | ambiguous | 0.355 | ambiguous | -0.989 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
S/Y | 0.2603 | likely_benign | 0.2275 | benign | -0.714 | Destabilizing | 0.998 | D | 0.533 | neutral | N | 0.507096769 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.