Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23589 | 70990;70991;70992 | chr2:178575367;178575366;178575365 | chr2:179440094;179440093;179440092 |
N2AB | 21948 | 66067;66068;66069 | chr2:178575367;178575366;178575365 | chr2:179440094;179440093;179440092 |
N2A | 21021 | 63286;63287;63288 | chr2:178575367;178575366;178575365 | chr2:179440094;179440093;179440092 |
N2B | 14524 | 43795;43796;43797 | chr2:178575367;178575366;178575365 | chr2:179440094;179440093;179440092 |
Novex-1 | 14649 | 44170;44171;44172 | chr2:178575367;178575366;178575365 | chr2:179440094;179440093;179440092 |
Novex-2 | 14716 | 44371;44372;44373 | chr2:178575367;178575366;178575365 | chr2:179440094;179440093;179440092 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.88 | N | 0.533 | 0.332 | 0.254761474806 | gnomAD-4.0.0 | 1.59176E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85899E-06 | 0 | 0 |
E/Q | rs776167958 | -0.666 | 0.914 | N | 0.588 | 0.247 | 0.286848849266 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/Q | rs776167958 | -0.666 | 0.914 | N | 0.588 | 0.247 | 0.286848849266 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs776167958 | -0.666 | 0.914 | N | 0.588 | 0.247 | 0.286848849266 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4705E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2369 | likely_benign | 0.2129 | benign | -0.485 | Destabilizing | 0.799 | D | 0.565 | neutral | N | 0.515555927 | None | None | I |
E/C | 0.8759 | likely_pathogenic | 0.8702 | pathogenic | -0.358 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/D | 0.1065 | likely_benign | 0.1168 | benign | -0.52 | Destabilizing | None | N | 0.259 | neutral | N | 0.501242622 | None | None | I |
E/F | 0.8225 | likely_pathogenic | 0.8107 | pathogenic | 0.126 | Stabilizing | 0.995 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/G | 0.2784 | likely_benign | 0.2582 | benign | -0.769 | Destabilizing | 0.93 | D | 0.572 | neutral | N | 0.475256352 | None | None | I |
E/H | 0.5094 | ambiguous | 0.49 | ambiguous | 0.418 | Stabilizing | 0.993 | D | 0.638 | neutral | None | None | None | None | I |
E/I | 0.5731 | likely_pathogenic | 0.5331 | ambiguous | 0.264 | Stabilizing | 0.97 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/K | 0.4023 | ambiguous | 0.3581 | ambiguous | 0.138 | Stabilizing | 0.88 | D | 0.533 | neutral | N | 0.491660347 | None | None | I |
E/L | 0.5969 | likely_pathogenic | 0.56 | ambiguous | 0.264 | Stabilizing | 0.97 | D | 0.677 | prob.neutral | None | None | None | None | I |
E/M | 0.6655 | likely_pathogenic | 0.6237 | pathogenic | 0.263 | Stabilizing | 0.985 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/N | 0.2844 | likely_benign | 0.2862 | benign | -0.525 | Destabilizing | 0.515 | D | 0.541 | neutral | None | None | None | None | I |
E/P | 0.9123 | likely_pathogenic | 0.8986 | pathogenic | 0.035 | Stabilizing | 0.829 | D | 0.661 | neutral | None | None | None | None | I |
E/Q | 0.2042 | likely_benign | 0.1807 | benign | -0.409 | Destabilizing | 0.914 | D | 0.588 | neutral | N | 0.501010549 | None | None | I |
E/R | 0.4935 | ambiguous | 0.4535 | ambiguous | 0.552 | Stabilizing | 0.986 | D | 0.613 | neutral | None | None | None | None | I |
E/S | 0.2192 | likely_benign | 0.208 | benign | -0.704 | Destabilizing | 0.84 | D | 0.52 | neutral | None | None | None | None | I |
E/T | 0.2848 | likely_benign | 0.2548 | benign | -0.452 | Destabilizing | 0.937 | D | 0.618 | neutral | None | None | None | None | I |
E/V | 0.3495 | ambiguous | 0.3198 | benign | 0.035 | Stabilizing | 0.946 | D | 0.634 | neutral | N | 0.515075924 | None | None | I |
E/W | 0.9306 | likely_pathogenic | 0.9256 | pathogenic | 0.424 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/Y | 0.6832 | likely_pathogenic | 0.6777 | pathogenic | 0.412 | Stabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.