Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23600 | 71023;71024;71025 | chr2:178575334;178575333;178575332 | chr2:179440061;179440060;179440059 |
N2AB | 21959 | 66100;66101;66102 | chr2:178575334;178575333;178575332 | chr2:179440061;179440060;179440059 |
N2A | 21032 | 63319;63320;63321 | chr2:178575334;178575333;178575332 | chr2:179440061;179440060;179440059 |
N2B | 14535 | 43828;43829;43830 | chr2:178575334;178575333;178575332 | chr2:179440061;179440060;179440059 |
Novex-1 | 14660 | 44203;44204;44205 | chr2:178575334;178575333;178575332 | chr2:179440061;179440060;179440059 |
Novex-2 | 14727 | 44404;44405;44406 | chr2:178575334;178575333;178575332 | chr2:179440061;179440060;179440059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1168061388 | -0.729 | 0.945 | N | 0.531 | 0.315 | 0.378847511475 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14811E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs1168061388 | -0.729 | 0.945 | N | 0.531 | 0.315 | 0.378847511475 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs1168061388 | -0.729 | 0.945 | N | 0.531 | 0.315 | 0.378847511475 | gnomAD-4.0.0 | 6.57488E-06 | None | None | None | None | N | None | 2.41255E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | None | None | 0.815 | N | 0.423 | 0.179 | 0.358134431457 | gnomAD-4.0.0 | 1.59193E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85919E-06 | 0 | 0 |
E/G | None | None | 0.998 | N | 0.695 | 0.404 | 0.424313518543 | gnomAD-4.0.0 | 2.40067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2214 | likely_benign | 0.2126 | benign | -0.666 | Destabilizing | 0.945 | D | 0.531 | neutral | N | 0.475865463 | None | None | N |
E/C | 0.9305 | likely_pathogenic | 0.9232 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/D | 0.4354 | ambiguous | 0.4085 | ambiguous | -1.119 | Destabilizing | 0.815 | D | 0.423 | neutral | N | 0.478485582 | None | None | N |
E/F | 0.9138 | likely_pathogenic | 0.9023 | pathogenic | 0.167 | Stabilizing | 0.998 | D | 0.818 | deleterious | None | None | None | None | N |
E/G | 0.4415 | ambiguous | 0.3981 | ambiguous | -1.103 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | N | 0.488640573 | None | None | N |
E/H | 0.8216 | likely_pathogenic | 0.8032 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/I | 0.4531 | ambiguous | 0.4169 | ambiguous | 0.547 | Stabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | N |
E/K | 0.4797 | ambiguous | 0.4346 | ambiguous | -0.589 | Destabilizing | 0.984 | D | 0.485 | neutral | N | 0.486099811 | None | None | N |
E/L | 0.6099 | likely_pathogenic | 0.5828 | pathogenic | 0.547 | Stabilizing | 0.986 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/M | 0.5395 | ambiguous | 0.52 | ambiguous | 0.989 | Stabilizing | 0.998 | D | 0.774 | deleterious | None | None | None | None | N |
E/N | 0.5738 | likely_pathogenic | 0.5419 | ambiguous | -1.205 | Destabilizing | 0.985 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/P | 0.7516 | likely_pathogenic | 0.728 | pathogenic | 0.165 | Stabilizing | 0.977 | D | 0.82 | deleterious | None | None | None | None | N |
E/Q | 0.2735 | likely_benign | 0.2617 | benign | -0.976 | Destabilizing | 0.997 | D | 0.639 | neutral | N | 0.467609803 | None | None | N |
E/R | 0.6546 | likely_pathogenic | 0.6095 | pathogenic | -0.331 | Destabilizing | 0.997 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/S | 0.3968 | ambiguous | 0.3813 | ambiguous | -1.589 | Destabilizing | 0.958 | D | 0.489 | neutral | None | None | None | None | N |
E/T | 0.3081 | likely_benign | 0.2851 | benign | -1.208 | Destabilizing | 0.164 | N | 0.349 | neutral | None | None | None | None | N |
E/V | 0.2716 | likely_benign | 0.2477 | benign | 0.165 | Stabilizing | 0.974 | D | 0.685 | prob.neutral | N | 0.474739827 | None | None | N |
E/W | 0.9768 | likely_pathogenic | 0.9723 | pathogenic | 0.416 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Y | 0.8574 | likely_pathogenic | 0.8412 | pathogenic | 0.442 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.