Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23641 | 71146;71147;71148 | chr2:178575211;178575210;178575209 | chr2:179439938;179439937;179439936 |
N2AB | 22000 | 66223;66224;66225 | chr2:178575211;178575210;178575209 | chr2:179439938;179439937;179439936 |
N2A | 21073 | 63442;63443;63444 | chr2:178575211;178575210;178575209 | chr2:179439938;179439937;179439936 |
N2B | 14576 | 43951;43952;43953 | chr2:178575211;178575210;178575209 | chr2:179439938;179439937;179439936 |
Novex-1 | 14701 | 44326;44327;44328 | chr2:178575211;178575210;178575209 | chr2:179439938;179439937;179439936 |
Novex-2 | 14768 | 44527;44528;44529 | chr2:178575211;178575210;178575209 | chr2:179439938;179439937;179439936 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs778715011 | -0.636 | 0.817 | N | 0.291 | 0.159 | 0.223847106136 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.68E-05 | None | 6.57E-05 | None | 0 | 0 | 0 |
K/Q | rs778715011 | -0.636 | 0.817 | N | 0.291 | 0.159 | 0.223847106136 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
K/Q | rs778715011 | -0.636 | 0.817 | N | 0.291 | 0.159 | 0.223847106136 | gnomAD-4.0.0 | 8.06037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.24235E-05 | None | 0 | 0 | 2.5435E-06 | 9.89381E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7307 | likely_pathogenic | 0.8033 | pathogenic | -0.101 | Destabilizing | 0.985 | D | 0.557 | neutral | None | None | None | None | N |
K/C | 0.8204 | likely_pathogenic | 0.8491 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/D | 0.7037 | likely_pathogenic | 0.78 | pathogenic | 0.203 | Stabilizing | 0.971 | D | 0.601 | neutral | None | None | None | None | N |
K/E | 0.4336 | ambiguous | 0.5243 | ambiguous | 0.264 | Stabilizing | 0.961 | D | 0.552 | neutral | N | 0.510099753 | None | None | N |
K/F | 0.9455 | likely_pathogenic | 0.9622 | pathogenic | -0.036 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/G | 0.5284 | ambiguous | 0.5968 | pathogenic | -0.389 | Destabilizing | 0.985 | D | 0.625 | neutral | None | None | None | None | N |
K/H | 0.3626 | ambiguous | 0.4178 | ambiguous | -0.747 | Destabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
K/I | 0.8881 | likely_pathogenic | 0.9216 | pathogenic | 0.604 | Stabilizing | 0.989 | D | 0.716 | prob.delet. | N | 0.494905814 | None | None | N |
K/L | 0.7072 | likely_pathogenic | 0.7747 | pathogenic | 0.604 | Stabilizing | 0.971 | D | 0.588 | neutral | None | None | None | None | N |
K/M | 0.5422 | ambiguous | 0.6276 | pathogenic | 0.293 | Stabilizing | 0.931 | D | 0.475 | neutral | None | None | None | None | N |
K/N | 0.4752 | ambiguous | 0.5551 | ambiguous | -0.009 | Destabilizing | 0.606 | D | 0.286 | neutral | N | 0.499845474 | None | None | N |
K/P | 0.8985 | likely_pathogenic | 0.9284 | pathogenic | 0.4 | Stabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
K/Q | 0.2104 | likely_benign | 0.2604 | benign | -0.079 | Destabilizing | 0.817 | D | 0.291 | neutral | N | 0.474525742 | None | None | N |
K/R | 0.1196 | likely_benign | 0.1298 | benign | -0.318 | Destabilizing | 0.98 | D | 0.511 | neutral | N | 0.470042642 | None | None | N |
K/S | 0.6421 | likely_pathogenic | 0.7241 | pathogenic | -0.543 | Destabilizing | 0.985 | D | 0.522 | neutral | None | None | None | None | N |
K/T | 0.5198 | ambiguous | 0.6207 | pathogenic | -0.301 | Destabilizing | 0.98 | D | 0.603 | neutral | N | 0.503251138 | None | None | N |
K/V | 0.8342 | likely_pathogenic | 0.8842 | pathogenic | 0.4 | Stabilizing | 0.971 | D | 0.633 | neutral | None | None | None | None | N |
K/W | 0.9155 | likely_pathogenic | 0.9374 | pathogenic | -0.019 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
K/Y | 0.7761 | likely_pathogenic | 0.8241 | pathogenic | 0.309 | Stabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.