Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23644 | 71155;71156;71157 | chr2:178575202;178575201;178575200 | chr2:179439929;179439928;179439927 |
N2AB | 22003 | 66232;66233;66234 | chr2:178575202;178575201;178575200 | chr2:179439929;179439928;179439927 |
N2A | 21076 | 63451;63452;63453 | chr2:178575202;178575201;178575200 | chr2:179439929;179439928;179439927 |
N2B | 14579 | 43960;43961;43962 | chr2:178575202;178575201;178575200 | chr2:179439929;179439928;179439927 |
Novex-1 | 14704 | 44335;44336;44337 | chr2:178575202;178575201;178575200 | chr2:179439929;179439928;179439927 |
Novex-2 | 14771 | 44536;44537;44538 | chr2:178575202;178575201;178575200 | chr2:179439929;179439928;179439927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.884 | N | 0.387 | 0.455 | 0.750485479121 | gnomAD-4.0.0 | 1.59348E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88445E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4863 | ambiguous | 0.5354 | ambiguous | -1.094 | Destabilizing | 0.373 | N | 0.354 | neutral | None | None | None | None | N |
I/C | 0.8146 | likely_pathogenic | 0.8257 | pathogenic | -0.745 | Destabilizing | 0.996 | D | 0.405 | neutral | None | None | None | None | N |
I/D | 0.9275 | likely_pathogenic | 0.9419 | pathogenic | -0.84 | Destabilizing | 0.984 | D | 0.438 | neutral | None | None | None | None | N |
I/E | 0.8384 | likely_pathogenic | 0.8741 | pathogenic | -0.876 | Destabilizing | 0.953 | D | 0.429 | neutral | None | None | None | None | N |
I/F | 0.2324 | likely_benign | 0.2554 | benign | -0.8 | Destabilizing | 0.884 | D | 0.363 | neutral | N | 0.489237955 | None | None | N |
I/G | 0.8669 | likely_pathogenic | 0.8922 | pathogenic | -1.341 | Destabilizing | 0.953 | D | 0.409 | neutral | None | None | None | None | N |
I/H | 0.7118 | likely_pathogenic | 0.731 | pathogenic | -0.506 | Destabilizing | 0.996 | D | 0.435 | neutral | None | None | None | None | N |
I/K | 0.6765 | likely_pathogenic | 0.7251 | pathogenic | -0.837 | Destabilizing | 0.953 | D | 0.422 | neutral | None | None | None | None | N |
I/L | 0.1571 | likely_benign | 0.1757 | benign | -0.52 | Destabilizing | 0.003 | N | 0.149 | neutral | N | 0.513817635 | None | None | N |
I/M | 0.1328 | likely_benign | 0.1487 | benign | -0.554 | Destabilizing | 0.884 | D | 0.421 | neutral | N | 0.520802323 | None | None | N |
I/N | 0.563 | ambiguous | 0.6098 | pathogenic | -0.648 | Destabilizing | 0.979 | D | 0.438 | neutral | N | 0.488223997 | None | None | N |
I/P | 0.8831 | likely_pathogenic | 0.9009 | pathogenic | -0.68 | Destabilizing | 0.984 | D | 0.436 | neutral | None | None | None | None | N |
I/Q | 0.7065 | likely_pathogenic | 0.7396 | pathogenic | -0.844 | Destabilizing | 0.984 | D | 0.443 | neutral | None | None | None | None | N |
I/R | 0.5687 | likely_pathogenic | 0.6194 | pathogenic | -0.218 | Destabilizing | 0.953 | D | 0.438 | neutral | None | None | None | None | N |
I/S | 0.5127 | ambiguous | 0.5585 | ambiguous | -1.108 | Destabilizing | 0.884 | D | 0.387 | neutral | N | 0.501907131 | None | None | N |
I/T | 0.2257 | likely_benign | 0.2613 | benign | -1.033 | Destabilizing | 0.684 | D | 0.344 | neutral | N | 0.440877315 | None | None | N |
I/V | 0.0937 | likely_benign | 0.0998 | benign | -0.68 | Destabilizing | 0.003 | N | 0.178 | neutral | N | 0.455902695 | None | None | N |
I/W | 0.838 | likely_pathogenic | 0.8434 | pathogenic | -0.85 | Destabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | N |
I/Y | 0.632 | likely_pathogenic | 0.6572 | pathogenic | -0.628 | Destabilizing | 0.953 | D | 0.401 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.