Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23655 | 71188;71189;71190 | chr2:178575169;178575168;178575167 | chr2:179439896;179439895;179439894 |
N2AB | 22014 | 66265;66266;66267 | chr2:178575169;178575168;178575167 | chr2:179439896;179439895;179439894 |
N2A | 21087 | 63484;63485;63486 | chr2:178575169;178575168;178575167 | chr2:179439896;179439895;179439894 |
N2B | 14590 | 43993;43994;43995 | chr2:178575169;178575168;178575167 | chr2:179439896;179439895;179439894 |
Novex-1 | 14715 | 44368;44369;44370 | chr2:178575169;178575168;178575167 | chr2:179439896;179439895;179439894 |
Novex-2 | 14782 | 44569;44570;44571 | chr2:178575169;178575168;178575167 | chr2:179439896;179439895;179439894 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs794729488 | None | 1.0 | N | 0.835 | 0.445 | 0.586935410679 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/T | rs794729488 | None | 1.0 | N | 0.835 | 0.445 | 0.586935410679 | gnomAD-4.0.0 | 1.30221E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.78064E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9515 | likely_pathogenic | 0.9617 | pathogenic | -1.828 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
I/C | 0.9491 | likely_pathogenic | 0.9584 | pathogenic | -1.398 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
I/D | 0.9979 | likely_pathogenic | 0.9984 | pathogenic | -1.097 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
I/E | 0.9963 | likely_pathogenic | 0.9973 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
I/F | 0.5724 | likely_pathogenic | 0.6258 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.462364385 | None | None | N |
I/G | 0.9899 | likely_pathogenic | 0.9923 | pathogenic | -2.219 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
I/H | 0.9913 | likely_pathogenic | 0.9935 | pathogenic | -1.185 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
I/K | 0.9905 | likely_pathogenic | 0.9928 | pathogenic | -1.331 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
I/L | 0.2795 | likely_benign | 0.3242 | benign | -0.788 | Destabilizing | 0.993 | D | 0.459 | neutral | N | 0.507386656 | None | None | N |
I/M | 0.3501 | ambiguous | 0.4083 | ambiguous | -0.824 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.467390814 | None | None | N |
I/N | 0.9638 | likely_pathogenic | 0.9717 | pathogenic | -1.39 | Destabilizing | 1.0 | D | 0.9 | deleterious | N | 0.485748559 | None | None | N |
I/P | 0.9957 | likely_pathogenic | 0.9966 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
I/Q | 0.9929 | likely_pathogenic | 0.9948 | pathogenic | -1.413 | Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
I/R | 0.9888 | likely_pathogenic | 0.9915 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
I/S | 0.9664 | likely_pathogenic | 0.9734 | pathogenic | -2.1 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.462364385 | None | None | N |
I/T | 0.9605 | likely_pathogenic | 0.971 | pathogenic | -1.867 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.461857406 | None | None | N |
I/V | 0.1511 | likely_benign | 0.171 | benign | -1.106 | Destabilizing | 0.993 | D | 0.415 | neutral | N | 0.422189114 | None | None | N |
I/W | 0.9896 | likely_pathogenic | 0.9914 | pathogenic | -1.148 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
I/Y | 0.9373 | likely_pathogenic | 0.9506 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.