Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23693 | 71302;71303;71304 | chr2:178575055;178575054;178575053 | chr2:179439782;179439781;179439780 |
N2AB | 22052 | 66379;66380;66381 | chr2:178575055;178575054;178575053 | chr2:179439782;179439781;179439780 |
N2A | 21125 | 63598;63599;63600 | chr2:178575055;178575054;178575053 | chr2:179439782;179439781;179439780 |
N2B | 14628 | 44107;44108;44109 | chr2:178575055;178575054;178575053 | chr2:179439782;179439781;179439780 |
Novex-1 | 14753 | 44482;44483;44484 | chr2:178575055;178575054;178575053 | chr2:179439782;179439781;179439780 |
Novex-2 | 14820 | 44683;44684;44685 | chr2:178575055;178575054;178575053 | chr2:179439782;179439781;179439780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.998 | D | 0.691 | 0.574 | 0.73377832567 | gnomAD-4.0.0 | 2.05308E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69875E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9304 | likely_pathogenic | 0.9589 | pathogenic | -2.775 | Highly Destabilizing | 0.992 | D | 0.671 | neutral | None | None | None | None | N |
I/C | 0.9265 | likely_pathogenic | 0.9517 | pathogenic | -2.661 | Highly Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/D | 0.9964 | likely_pathogenic | 0.9976 | pathogenic | -3.796 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/E | 0.9905 | likely_pathogenic | 0.9939 | pathogenic | -3.624 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/F | 0.4784 | ambiguous | 0.5447 | ambiguous | -1.748 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | D | 0.559487793 | None | None | N |
I/G | 0.9891 | likely_pathogenic | 0.9935 | pathogenic | -3.27 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/H | 0.9739 | likely_pathogenic | 0.9838 | pathogenic | -2.667 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
I/K | 0.9667 | likely_pathogenic | 0.9787 | pathogenic | -2.405 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/L | 0.2205 | likely_benign | 0.2688 | benign | -1.348 | Destabilizing | 0.889 | D | 0.42 | neutral | D | 0.552061683 | None | None | N |
I/M | 0.205 | likely_benign | 0.2547 | benign | -1.45 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | D | 0.57533571 | None | None | N |
I/N | 0.9482 | likely_pathogenic | 0.9663 | pathogenic | -2.803 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | D | 0.618305813 | None | None | N |
I/P | 0.9965 | likely_pathogenic | 0.9974 | pathogenic | -1.806 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
I/Q | 0.9747 | likely_pathogenic | 0.9838 | pathogenic | -2.752 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
I/R | 0.9529 | likely_pathogenic | 0.9692 | pathogenic | -1.92 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
I/S | 0.9411 | likely_pathogenic | 0.9635 | pathogenic | -3.386 | Highly Destabilizing | 0.998 | D | 0.834 | deleterious | D | 0.592767701 | None | None | N |
I/T | 0.9159 | likely_pathogenic | 0.949 | pathogenic | -3.08 | Highly Destabilizing | 0.989 | D | 0.749 | deleterious | D | 0.601882843 | None | None | N |
I/V | 0.1263 | likely_benign | 0.1457 | benign | -1.806 | Destabilizing | 0.333 | N | 0.246 | neutral | N | 0.51026744 | None | None | N |
I/W | 0.9637 | likely_pathogenic | 0.9722 | pathogenic | -2.18 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
I/Y | 0.9022 | likely_pathogenic | 0.9306 | pathogenic | -1.976 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.