Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23720 | 71383;71384;71385 | chr2:178574974;178574973;178574972 | chr2:179439701;179439700;179439699 |
N2AB | 22079 | 66460;66461;66462 | chr2:178574974;178574973;178574972 | chr2:179439701;179439700;179439699 |
N2A | 21152 | 63679;63680;63681 | chr2:178574974;178574973;178574972 | chr2:179439701;179439700;179439699 |
N2B | 14655 | 44188;44189;44190 | chr2:178574974;178574973;178574972 | chr2:179439701;179439700;179439699 |
Novex-1 | 14780 | 44563;44564;44565 | chr2:178574974;178574973;178574972 | chr2:179439701;179439700;179439699 |
Novex-2 | 14847 | 44764;44765;44766 | chr2:178574974;178574973;178574972 | chr2:179439701;179439700;179439699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.997 | D | 0.776 | 0.468 | 0.61789491966 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
T/S | rs1709538154 | None | 0.362 | N | 0.363 | 0.14 | 0.340032825777 | gnomAD-4.0.0 | 1.59251E-06 | None | None | None | None | N | None | 5.65803E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1045 | likely_benign | 0.1058 | benign | -0.791 | Destabilizing | 0.898 | D | 0.524 | neutral | D | 0.525978856 | None | None | N |
T/C | 0.3628 | ambiguous | 0.3799 | ambiguous | -0.548 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/D | 0.3741 | ambiguous | 0.3823 | ambiguous | -0.33 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/E | 0.3084 | likely_benign | 0.3145 | benign | -0.222 | Destabilizing | 0.995 | D | 0.718 | prob.delet. | None | None | None | None | N |
T/F | 0.227 | likely_benign | 0.228 | benign | -0.538 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | N |
T/G | 0.3185 | likely_benign | 0.3202 | benign | -1.143 | Destabilizing | 0.966 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/H | 0.1892 | likely_benign | 0.2005 | benign | -1.318 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
T/I | 0.1446 | likely_benign | 0.1447 | benign | 0.089 | Stabilizing | 0.997 | D | 0.776 | deleterious | D | 0.533406261 | None | None | N |
T/K | 0.2092 | likely_benign | 0.2185 | benign | -0.53 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/L | 0.1009 | likely_benign | 0.102 | benign | 0.089 | Stabilizing | 0.983 | D | 0.669 | neutral | None | None | None | None | N |
T/M | 0.0962 | likely_benign | 0.0941 | benign | 0.02 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/N | 0.1073 | likely_benign | 0.111 | benign | -0.802 | Destabilizing | 0.993 | D | 0.682 | prob.neutral | N | 0.501389843 | None | None | N |
T/P | 0.4852 | ambiguous | 0.4507 | ambiguous | -0.171 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.502724309 | None | None | N |
T/Q | 0.2075 | likely_benign | 0.2213 | benign | -0.725 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
T/R | 0.1873 | likely_benign | 0.1885 | benign | -0.574 | Destabilizing | 0.995 | D | 0.767 | deleterious | None | None | None | None | N |
T/S | 0.1101 | likely_benign | 0.1116 | benign | -1.088 | Destabilizing | 0.362 | N | 0.363 | neutral | N | 0.495519876 | None | None | N |
T/V | 0.1217 | likely_benign | 0.1246 | benign | -0.171 | Destabilizing | 0.983 | D | 0.604 | neutral | None | None | None | None | N |
T/W | 0.5708 | likely_pathogenic | 0.5548 | ambiguous | -0.586 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/Y | 0.2138 | likely_benign | 0.2228 | benign | -0.269 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.