Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23764 | 71515;71516;71517 | chr2:178574842;178574841;178574840 | chr2:179439569;179439568;179439567 |
N2AB | 22123 | 66592;66593;66594 | chr2:178574842;178574841;178574840 | chr2:179439569;179439568;179439567 |
N2A | 21196 | 63811;63812;63813 | chr2:178574842;178574841;178574840 | chr2:179439569;179439568;179439567 |
N2B | 14699 | 44320;44321;44322 | chr2:178574842;178574841;178574840 | chr2:179439569;179439568;179439567 |
Novex-1 | 14824 | 44695;44696;44697 | chr2:178574842;178574841;178574840 | chr2:179439569;179439568;179439567 |
Novex-2 | 14891 | 44896;44897;44898 | chr2:178574842;178574841;178574840 | chr2:179439569;179439568;179439567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs773302092 | -0.923 | 0.982 | N | 0.691 | 0.357 | 0.609194942736 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs773302092 | -0.923 | 0.982 | N | 0.691 | 0.357 | 0.609194942736 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8121 | likely_pathogenic | 0.8194 | pathogenic | -2.305 | Highly Destabilizing | 0.939 | D | 0.605 | neutral | D | 0.528639697 | None | None | N |
V/C | 0.9612 | likely_pathogenic | 0.9623 | pathogenic | -1.655 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
V/D | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -3.242 | Highly Destabilizing | 0.998 | D | 0.892 | deleterious | None | None | None | None | N |
V/E | 0.9962 | likely_pathogenic | 0.997 | pathogenic | -2.902 | Highly Destabilizing | 0.997 | D | 0.885 | deleterious | D | 0.552277361 | None | None | N |
V/F | 0.9121 | likely_pathogenic | 0.9328 | pathogenic | -1.273 | Destabilizing | 0.986 | D | 0.809 | deleterious | None | None | None | None | N |
V/G | 0.9558 | likely_pathogenic | 0.9614 | pathogenic | -2.922 | Highly Destabilizing | 0.997 | D | 0.901 | deleterious | D | 0.552277361 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -2.881 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | None | None | None | None | N |
V/I | 0.0947 | likely_benign | 0.1016 | benign | -0.481 | Destabilizing | 0.06 | N | 0.255 | neutral | None | None | None | None | N |
V/K | 0.9967 | likely_pathogenic | 0.9975 | pathogenic | -1.761 | Destabilizing | 0.993 | D | 0.887 | deleterious | None | None | None | None | N |
V/L | 0.4562 | ambiguous | 0.5057 | ambiguous | -0.481 | Destabilizing | 0.76 | D | 0.493 | neutral | D | 0.52549328 | None | None | N |
V/M | 0.6437 | likely_pathogenic | 0.6897 | pathogenic | -0.86 | Destabilizing | 0.982 | D | 0.691 | prob.neutral | N | 0.510788932 | None | None | N |
V/N | 0.9963 | likely_pathogenic | 0.9972 | pathogenic | -2.552 | Highly Destabilizing | 0.998 | D | 0.904 | deleterious | None | None | None | None | N |
V/P | 0.996 | likely_pathogenic | 0.9969 | pathogenic | -1.074 | Destabilizing | 0.998 | D | 0.889 | deleterious | None | None | None | None | N |
V/Q | 0.9953 | likely_pathogenic | 0.9964 | pathogenic | -2.118 | Highly Destabilizing | 0.998 | D | 0.905 | deleterious | None | None | None | None | N |
V/R | 0.9933 | likely_pathogenic | 0.9948 | pathogenic | -2.044 | Highly Destabilizing | 0.998 | D | 0.908 | deleterious | None | None | None | None | N |
V/S | 0.9772 | likely_pathogenic | 0.9794 | pathogenic | -2.992 | Highly Destabilizing | 0.993 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.8681 | likely_pathogenic | 0.8815 | pathogenic | -2.483 | Highly Destabilizing | 0.953 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/W | 0.9989 | likely_pathogenic | 0.9991 | pathogenic | -1.769 | Destabilizing | 0.999 | D | 0.848 | deleterious | None | None | None | None | N |
V/Y | 0.9955 | likely_pathogenic | 0.9965 | pathogenic | -1.516 | Destabilizing | 0.998 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.