Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23789 | 71590;71591;71592 | chr2:178574767;178574766;178574765 | chr2:179439494;179439493;179439492 |
N2AB | 22148 | 66667;66668;66669 | chr2:178574767;178574766;178574765 | chr2:179439494;179439493;179439492 |
N2A | 21221 | 63886;63887;63888 | chr2:178574767;178574766;178574765 | chr2:179439494;179439493;179439492 |
N2B | 14724 | 44395;44396;44397 | chr2:178574767;178574766;178574765 | chr2:179439494;179439493;179439492 |
Novex-1 | 14849 | 44770;44771;44772 | chr2:178574767;178574766;178574765 | chr2:179439494;179439493;179439492 |
Novex-2 | 14916 | 44971;44972;44973 | chr2:178574767;178574766;178574765 | chr2:179439494;179439493;179439492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.002 | N | 0.127 | 0.103 | 0.148003135375 | gnomAD-4.0.0 | 6.84911E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65876E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0902 | likely_benign | 0.067 | benign | -0.606 | Destabilizing | 0.002 | N | 0.127 | neutral | N | 0.49778103 | None | None | N |
T/C | 0.3763 | ambiguous | 0.3093 | benign | -0.436 | Destabilizing | 0.92 | D | 0.551 | neutral | None | None | None | None | N |
T/D | 0.7197 | likely_pathogenic | 0.6474 | pathogenic | 0.225 | Stabilizing | 0.617 | D | 0.53 | neutral | None | None | None | None | N |
T/E | 0.6222 | likely_pathogenic | 0.5709 | pathogenic | 0.226 | Stabilizing | 0.617 | D | 0.485 | neutral | None | None | None | None | N |
T/F | 0.3842 | ambiguous | 0.2838 | benign | -0.7 | Destabilizing | 0.85 | D | 0.574 | neutral | None | None | None | None | N |
T/G | 0.1885 | likely_benign | 0.1523 | benign | -0.85 | Destabilizing | 0.447 | N | 0.488 | neutral | None | None | None | None | N |
T/H | 0.4182 | ambiguous | 0.3588 | ambiguous | -1.016 | Destabilizing | 0.992 | D | 0.548 | neutral | None | None | None | None | N |
T/I | 0.2349 | likely_benign | 0.1618 | benign | -0.057 | Destabilizing | 0.004 | N | 0.301 | neutral | N | 0.473462834 | None | None | N |
T/K | 0.4496 | ambiguous | 0.4186 | ambiguous | -0.555 | Destabilizing | 0.617 | D | 0.521 | neutral | None | None | None | None | N |
T/L | 0.1201 | likely_benign | 0.0914 | benign | -0.057 | Destabilizing | 0.103 | N | 0.407 | neutral | None | None | None | None | N |
T/M | 0.1104 | likely_benign | 0.0857 | benign | -0.035 | Destabilizing | 0.85 | D | 0.559 | neutral | None | None | None | None | N |
T/N | 0.1647 | likely_benign | 0.1286 | benign | -0.491 | Destabilizing | 0.549 | D | 0.469 | neutral | N | 0.50786195 | None | None | N |
T/P | 0.1236 | likely_benign | 0.0991 | benign | -0.208 | Destabilizing | 0.896 | D | 0.576 | neutral | N | 0.510902255 | None | None | N |
T/Q | 0.3444 | ambiguous | 0.3094 | benign | -0.58 | Destabilizing | 0.92 | D | 0.58 | neutral | None | None | None | None | N |
T/R | 0.4385 | ambiguous | 0.3908 | ambiguous | -0.355 | Destabilizing | 0.85 | D | 0.591 | neutral | None | None | None | None | N |
T/S | 0.1096 | likely_benign | 0.0844 | benign | -0.786 | Destabilizing | 0.016 | N | 0.19 | neutral | N | 0.48132871 | None | None | N |
T/V | 0.1473 | likely_benign | 0.1097 | benign | -0.208 | Destabilizing | 0.021 | N | 0.149 | neutral | None | None | None | None | N |
T/W | 0.7567 | likely_pathogenic | 0.6625 | pathogenic | -0.683 | Destabilizing | 0.992 | D | 0.571 | neutral | None | None | None | None | N |
T/Y | 0.4521 | ambiguous | 0.3522 | ambiguous | -0.428 | Destabilizing | 0.92 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.