Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23796 | 71611;71612;71613 | chr2:178574746;178574745;178574744 | chr2:179439473;179439472;179439471 |
N2AB | 22155 | 66688;66689;66690 | chr2:178574746;178574745;178574744 | chr2:179439473;179439472;179439471 |
N2A | 21228 | 63907;63908;63909 | chr2:178574746;178574745;178574744 | chr2:179439473;179439472;179439471 |
N2B | 14731 | 44416;44417;44418 | chr2:178574746;178574745;178574744 | chr2:179439473;179439472;179439471 |
Novex-1 | 14856 | 44791;44792;44793 | chr2:178574746;178574745;178574744 | chr2:179439473;179439472;179439471 |
Novex-2 | 14923 | 44992;44993;44994 | chr2:178574746;178574745;178574744 | chr2:179439473;179439472;179439471 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs878854330 | None | 0.008 | N | 0.151 | 0.079 | 0.12205267543 | gnomAD-4.0.0 | 1.59336E-06 | None | None | None | None | N | None | 5.66059E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | None | None | 0.949 | N | 0.719 | 0.459 | 0.566737540366 | gnomAD-4.0.0 | 1.59334E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8618E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2212 | likely_benign | 0.2262 | benign | -1.006 | Destabilizing | 0.722 | D | 0.564 | neutral | N | 0.475700879 | None | None | N |
E/C | 0.8855 | likely_pathogenic | 0.8868 | pathogenic | -0.559 | Destabilizing | 0.996 | D | 0.786 | deleterious | None | None | None | None | N |
E/D | 0.4513 | ambiguous | 0.4574 | ambiguous | -1.186 | Destabilizing | 0.008 | N | 0.151 | neutral | N | 0.472066801 | None | None | N |
E/F | 0.9339 | likely_pathogenic | 0.927 | pathogenic | -0.449 | Destabilizing | 0.987 | D | 0.791 | deleterious | None | None | None | None | N |
E/G | 0.3864 | ambiguous | 0.3869 | ambiguous | -1.399 | Destabilizing | 0.722 | D | 0.642 | neutral | N | 0.485513475 | None | None | N |
E/H | 0.7351 | likely_pathogenic | 0.7169 | pathogenic | -0.798 | Destabilizing | 0.961 | D | 0.598 | neutral | None | None | None | None | N |
E/I | 0.5946 | likely_pathogenic | 0.6195 | pathogenic | 0.077 | Stabilizing | 0.961 | D | 0.795 | deleterious | None | None | None | None | N |
E/K | 0.3541 | ambiguous | 0.3632 | ambiguous | -0.855 | Destabilizing | 0.565 | D | 0.503 | neutral | N | 0.509264673 | None | None | N |
E/L | 0.5978 | likely_pathogenic | 0.6074 | pathogenic | 0.077 | Stabilizing | 0.923 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/M | 0.6274 | likely_pathogenic | 0.6334 | pathogenic | 0.617 | Stabilizing | 0.996 | D | 0.774 | deleterious | None | None | None | None | N |
E/N | 0.5432 | ambiguous | 0.5301 | ambiguous | -1.293 | Destabilizing | 0.633 | D | 0.535 | neutral | None | None | None | None | N |
E/P | 0.5563 | ambiguous | 0.5182 | ambiguous | -0.263 | Destabilizing | 0.961 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/Q | 0.1557 | likely_benign | 0.1474 | benign | -1.128 | Destabilizing | 0.092 | N | 0.15 | neutral | D | 0.525311561 | None | None | N |
E/R | 0.4899 | ambiguous | 0.4811 | ambiguous | -0.609 | Destabilizing | 0.775 | D | 0.54 | neutral | None | None | None | None | N |
E/S | 0.3358 | likely_benign | 0.3354 | benign | -1.683 | Destabilizing | 0.775 | D | 0.464 | neutral | None | None | None | None | N |
E/T | 0.3735 | ambiguous | 0.3772 | ambiguous | -1.352 | Destabilizing | 0.775 | D | 0.651 | neutral | None | None | None | None | N |
E/V | 0.3848 | ambiguous | 0.4019 | ambiguous | -0.263 | Destabilizing | 0.949 | D | 0.719 | prob.delet. | N | 0.474246075 | None | None | N |
E/W | 0.9827 | likely_pathogenic | 0.9796 | pathogenic | -0.22 | Destabilizing | 0.996 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.875 | likely_pathogenic | 0.8616 | pathogenic | -0.205 | Destabilizing | 0.987 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.