Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23802 | 71629;71630;71631 | chr2:178574728;178574727;178574726 | chr2:179439455;179439454;179439453 |
N2AB | 22161 | 66706;66707;66708 | chr2:178574728;178574727;178574726 | chr2:179439455;179439454;179439453 |
N2A | 21234 | 63925;63926;63927 | chr2:178574728;178574727;178574726 | chr2:179439455;179439454;179439453 |
N2B | 14737 | 44434;44435;44436 | chr2:178574728;178574727;178574726 | chr2:179439455;179439454;179439453 |
Novex-1 | 14862 | 44809;44810;44811 | chr2:178574728;178574727;178574726 | chr2:179439455;179439454;179439453 |
Novex-2 | 14929 | 45010;45011;45012 | chr2:178574728;178574727;178574726 | chr2:179439455;179439454;179439453 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1709454274 | None | 0.83 | D | 0.751 | 0.204 | 0.173771789658 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs1709454274 | None | 0.83 | D | 0.751 | 0.204 | 0.173771789658 | gnomAD-4.0.0 | 6.5773E-06 | None | None | None | None | N | None | 2.41394E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs1168152439 | None | 0.83 | N | 0.754 | 0.215 | 0.152612264143 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | rs1168152439 | None | 0.83 | N | 0.754 | 0.215 | 0.152612264143 | gnomAD-4.0.0 | 2.56416E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6457 | likely_pathogenic | 0.6004 | pathogenic | -1.097 | Destabilizing | 0.648 | D | 0.621 | neutral | None | None | None | None | N |
K/C | 0.6303 | likely_pathogenic | 0.5878 | pathogenic | -1.54 | Destabilizing | 0.993 | D | 0.803 | deleterious | None | None | None | None | N |
K/D | 0.9411 | likely_pathogenic | 0.9219 | pathogenic | -1.647 | Destabilizing | 0.866 | D | 0.745 | deleterious | None | None | None | None | N |
K/E | 0.5598 | ambiguous | 0.5142 | ambiguous | -1.439 | Destabilizing | 0.41 | N | 0.607 | neutral | N | 0.504685572 | None | None | N |
K/F | 0.8923 | likely_pathogenic | 0.8676 | pathogenic | -0.432 | Destabilizing | 0.98 | D | 0.805 | deleterious | None | None | None | None | N |
K/G | 0.7792 | likely_pathogenic | 0.7448 | pathogenic | -1.515 | Destabilizing | 0.866 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/H | 0.4215 | ambiguous | 0.3939 | ambiguous | -1.811 | Destabilizing | 0.98 | D | 0.775 | deleterious | None | None | None | None | N |
K/I | 0.667 | likely_pathogenic | 0.6189 | pathogenic | 0.045 | Stabilizing | 0.908 | D | 0.816 | deleterious | N | 0.462916307 | None | None | N |
K/L | 0.5972 | likely_pathogenic | 0.5826 | pathogenic | 0.045 | Stabilizing | 0.866 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/M | 0.3537 | ambiguous | 0.3505 | ambiguous | -0.344 | Destabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
K/N | 0.8021 | likely_pathogenic | 0.765 | pathogenic | -1.735 | Destabilizing | 0.83 | D | 0.751 | deleterious | D | 0.524138125 | None | None | N |
K/P | 0.9959 | likely_pathogenic | 0.9942 | pathogenic | -0.311 | Destabilizing | 0.929 | D | 0.763 | deleterious | None | None | None | None | N |
K/Q | 0.1913 | likely_benign | 0.1779 | benign | -1.558 | Destabilizing | 0.83 | D | 0.754 | deleterious | N | 0.467415263 | None | None | N |
K/R | 0.0693 | likely_benign | 0.0673 | benign | -1.46 | Destabilizing | 0.01 | N | 0.397 | neutral | N | 0.369139355 | None | None | N |
K/S | 0.6578 | likely_pathogenic | 0.6173 | pathogenic | -2.19 | Highly Destabilizing | 0.648 | D | 0.631 | neutral | None | None | None | None | N |
K/T | 0.3806 | ambiguous | 0.3614 | ambiguous | -1.77 | Destabilizing | 0.83 | D | 0.713 | prob.delet. | N | 0.455488903 | None | None | N |
K/V | 0.6065 | likely_pathogenic | 0.5732 | pathogenic | -0.311 | Destabilizing | 0.866 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/W | 0.8542 | likely_pathogenic | 0.809 | pathogenic | -0.515 | Destabilizing | 0.993 | D | 0.797 | deleterious | None | None | None | None | N |
K/Y | 0.7863 | likely_pathogenic | 0.7531 | pathogenic | -0.161 | Destabilizing | 0.929 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.