Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23806 | 71641;71642;71643 | chr2:178574716;178574715;178574714 | chr2:179439443;179439442;179439441 |
N2AB | 22165 | 66718;66719;66720 | chr2:178574716;178574715;178574714 | chr2:179439443;179439442;179439441 |
N2A | 21238 | 63937;63938;63939 | chr2:178574716;178574715;178574714 | chr2:179439443;179439442;179439441 |
N2B | 14741 | 44446;44447;44448 | chr2:178574716;178574715;178574714 | chr2:179439443;179439442;179439441 |
Novex-1 | 14866 | 44821;44822;44823 | chr2:178574716;178574715;178574714 | chr2:179439443;179439442;179439441 |
Novex-2 | 14933 | 45022;45023;45024 | chr2:178574716;178574715;178574714 | chr2:179439443;179439442;179439441 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 0.991 | N | 0.596 | 0.41 | 0.675195094354 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
R/T | None | None | 0.969 | N | 0.521 | 0.406 | 0.60163206408 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9786 | likely_pathogenic | 0.9704 | pathogenic | 0.069 | Stabilizing | 0.953 | D | 0.581 | neutral | None | None | None | None | I |
R/C | 0.8399 | likely_pathogenic | 0.8045 | pathogenic | -0.189 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
R/D | 0.9934 | likely_pathogenic | 0.9906 | pathogenic | -0.277 | Destabilizing | 0.06 | N | 0.525 | neutral | None | None | None | None | I |
R/E | 0.9753 | likely_pathogenic | 0.9661 | pathogenic | -0.198 | Destabilizing | 0.91 | D | 0.52 | neutral | None | None | None | None | I |
R/F | 0.9844 | likely_pathogenic | 0.981 | pathogenic | -0.181 | Destabilizing | 0.998 | D | 0.597 | neutral | None | None | None | None | I |
R/G | 0.9682 | likely_pathogenic | 0.9524 | pathogenic | -0.12 | Destabilizing | 0.939 | D | 0.553 | neutral | N | 0.509816459 | None | None | I |
R/H | 0.6569 | likely_pathogenic | 0.5918 | pathogenic | -0.877 | Destabilizing | 0.998 | D | 0.489 | neutral | None | None | None | None | I |
R/I | 0.9106 | likely_pathogenic | 0.8969 | pathogenic | 0.533 | Stabilizing | 0.991 | D | 0.596 | neutral | N | 0.472439868 | None | None | I |
R/K | 0.5298 | ambiguous | 0.4728 | ambiguous | -0.044 | Destabilizing | 0.863 | D | 0.483 | neutral | N | 0.450677729 | None | None | I |
R/L | 0.9095 | likely_pathogenic | 0.8914 | pathogenic | 0.533 | Stabilizing | 0.993 | D | 0.488 | neutral | None | None | None | None | I |
R/M | 0.956 | likely_pathogenic | 0.9479 | pathogenic | -0.067 | Destabilizing | 0.999 | D | 0.522 | neutral | None | None | None | None | I |
R/N | 0.9853 | likely_pathogenic | 0.9794 | pathogenic | -0.015 | Destabilizing | 0.91 | D | 0.515 | neutral | None | None | None | None | I |
R/P | 0.9788 | likely_pathogenic | 0.9642 | pathogenic | 0.399 | Stabilizing | 0.993 | D | 0.575 | neutral | None | None | None | None | I |
R/Q | 0.6871 | likely_pathogenic | 0.6016 | pathogenic | 0.006 | Stabilizing | 0.993 | D | 0.496 | neutral | None | None | None | None | I |
R/S | 0.9842 | likely_pathogenic | 0.9758 | pathogenic | -0.191 | Destabilizing | 0.939 | D | 0.563 | neutral | N | 0.468532771 | None | None | I |
R/T | 0.9674 | likely_pathogenic | 0.9516 | pathogenic | 0.025 | Stabilizing | 0.969 | D | 0.521 | neutral | N | 0.501682552 | None | None | I |
R/V | 0.9546 | likely_pathogenic | 0.9395 | pathogenic | 0.399 | Stabilizing | 0.993 | D | 0.593 | neutral | None | None | None | None | I |
R/W | 0.8598 | likely_pathogenic | 0.8352 | pathogenic | -0.355 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
R/Y | 0.9439 | likely_pathogenic | 0.9307 | pathogenic | 0.072 | Stabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.