Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23863 | 71812;71813;71814 | chr2:178574545;178574544;178574543 | chr2:179439272;179439271;179439270 |
N2AB | 22222 | 66889;66890;66891 | chr2:178574545;178574544;178574543 | chr2:179439272;179439271;179439270 |
N2A | 21295 | 64108;64109;64110 | chr2:178574545;178574544;178574543 | chr2:179439272;179439271;179439270 |
N2B | 14798 | 44617;44618;44619 | chr2:178574545;178574544;178574543 | chr2:179439272;179439271;179439270 |
Novex-1 | 14923 | 44992;44993;44994 | chr2:178574545;178574544;178574543 | chr2:179439272;179439271;179439270 |
Novex-2 | 14990 | 45193;45194;45195 | chr2:178574545;178574544;178574543 | chr2:179439272;179439271;179439270 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs367822322 | None | None | N | 0.159 | 0.151 | 0.154104182512 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs367822322 | None | None | N | 0.159 | 0.151 | 0.154104182512 | gnomAD-4.0.0 | 6.57462E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7211 | likely_pathogenic | 0.588 | pathogenic | -2.48 | Highly Destabilizing | 0.104 | N | 0.576 | neutral | D | 0.541641844 | None | None | N |
V/C | 0.9313 | likely_pathogenic | 0.8755 | pathogenic | -1.705 | Destabilizing | 0.968 | D | 0.777 | deleterious | None | None | None | None | N |
V/D | 0.9979 | likely_pathogenic | 0.9948 | pathogenic | -3.386 | Highly Destabilizing | 0.667 | D | 0.868 | deleterious | D | 0.553923202 | None | None | N |
V/E | 0.992 | likely_pathogenic | 0.9845 | pathogenic | -3.053 | Highly Destabilizing | 0.726 | D | 0.82 | deleterious | None | None | None | None | N |
V/F | 0.8087 | likely_pathogenic | 0.6543 | pathogenic | -1.422 | Destabilizing | 0.497 | N | 0.731 | prob.delet. | D | 0.553669712 | None | None | N |
V/G | 0.9346 | likely_pathogenic | 0.8752 | pathogenic | -3.095 | Highly Destabilizing | 0.667 | D | 0.842 | deleterious | D | 0.553923202 | None | None | N |
V/H | 0.9972 | likely_pathogenic | 0.9935 | pathogenic | -2.95 | Highly Destabilizing | 0.968 | D | 0.873 | deleterious | None | None | None | None | N |
V/I | 0.0699 | likely_benign | 0.0671 | benign | -0.677 | Destabilizing | None | N | 0.159 | neutral | N | 0.455878479 | None | None | N |
V/K | 0.9935 | likely_pathogenic | 0.9876 | pathogenic | -2.001 | Highly Destabilizing | 0.726 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.3329 | likely_benign | 0.2536 | benign | -0.677 | Destabilizing | None | N | 0.317 | neutral | N | 0.458692284 | None | None | N |
V/M | 0.4819 | ambiguous | 0.3431 | ambiguous | -0.88 | Destabilizing | 0.567 | D | 0.613 | neutral | None | None | None | None | N |
V/N | 0.991 | likely_pathogenic | 0.9787 | pathogenic | -2.734 | Highly Destabilizing | 0.89 | D | 0.877 | deleterious | None | None | None | None | N |
V/P | 0.9803 | likely_pathogenic | 0.9476 | pathogenic | -1.261 | Destabilizing | 0.89 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.9902 | likely_pathogenic | 0.9808 | pathogenic | -2.348 | Highly Destabilizing | 0.89 | D | 0.867 | deleterious | None | None | None | None | N |
V/R | 0.9878 | likely_pathogenic | 0.9772 | pathogenic | -2.118 | Highly Destabilizing | 0.726 | D | 0.874 | deleterious | None | None | None | None | N |
V/S | 0.9534 | likely_pathogenic | 0.9047 | pathogenic | -3.218 | Highly Destabilizing | 0.726 | D | 0.784 | deleterious | None | None | None | None | N |
V/T | 0.7807 | likely_pathogenic | 0.6535 | pathogenic | -2.725 | Highly Destabilizing | 0.272 | N | 0.591 | neutral | None | None | None | None | N |
V/W | 0.9962 | likely_pathogenic | 0.9882 | pathogenic | -1.957 | Destabilizing | 0.968 | D | 0.853 | deleterious | None | None | None | None | N |
V/Y | 0.9868 | likely_pathogenic | 0.9683 | pathogenic | -1.661 | Destabilizing | 0.726 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.