Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23906 | 71941;71942;71943 | chr2:178574416;178574415;178574414 | chr2:179439143;179439142;179439141 |
N2AB | 22265 | 67018;67019;67020 | chr2:178574416;178574415;178574414 | chr2:179439143;179439142;179439141 |
N2A | 21338 | 64237;64238;64239 | chr2:178574416;178574415;178574414 | chr2:179439143;179439142;179439141 |
N2B | 14841 | 44746;44747;44748 | chr2:178574416;178574415;178574414 | chr2:179439143;179439142;179439141 |
Novex-1 | 14966 | 45121;45122;45123 | chr2:178574416;178574415;178574414 | chr2:179439143;179439142;179439141 |
Novex-2 | 15033 | 45322;45323;45324 | chr2:178574416;178574415;178574414 | chr2:179439143;179439142;179439141 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | None | N | 0.052 | 0.15 | 0.332902724076 | gnomAD-4.0.0 | 6.84324E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99573E-07 | 0 | 0 |
M/T | None | None | 0.024 | N | 0.386 | 0.264 | 0.507449927524 | gnomAD-4.0.0 | 5.47444E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19642E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.2503 | likely_benign | 0.2772 | benign | -0.115 | Destabilizing | None | N | 0.101 | neutral | None | None | None | None | I |
M/C | 0.7198 | likely_pathogenic | 0.71 | pathogenic | -0.389 | Destabilizing | 0.356 | N | 0.395 | neutral | None | None | None | None | I |
M/D | 0.8432 | likely_pathogenic | 0.8783 | pathogenic | 0.578 | Stabilizing | 0.136 | N | 0.47 | neutral | None | None | None | None | I |
M/E | 0.5464 | ambiguous | 0.6091 | pathogenic | 0.519 | Stabilizing | 0.072 | N | 0.484 | neutral | None | None | None | None | I |
M/F | 0.3579 | ambiguous | 0.4142 | ambiguous | 0.036 | Stabilizing | 0.038 | N | 0.259 | neutral | None | None | None | None | I |
M/G | 0.6211 | likely_pathogenic | 0.6791 | pathogenic | -0.244 | Destabilizing | 0.038 | N | 0.457 | neutral | None | None | None | None | I |
M/H | 0.5109 | ambiguous | 0.5442 | ambiguous | 0.465 | Stabilizing | 0.628 | D | 0.439 | neutral | None | None | None | None | I |
M/I | 0.1697 | likely_benign | 0.2276 | benign | 0.116 | Stabilizing | None | N | 0.052 | neutral | N | 0.374257173 | None | None | I |
M/K | 0.1741 | likely_benign | 0.1921 | benign | 0.617 | Stabilizing | 0.055 | N | 0.417 | neutral | N | 0.40296114 | None | None | I |
M/L | 0.0809 | likely_benign | 0.0854 | benign | 0.116 | Stabilizing | None | N | 0.057 | neutral | N | 0.403886647 | None | None | I |
M/N | 0.5079 | ambiguous | 0.5789 | pathogenic | 0.682 | Stabilizing | 0.356 | N | 0.463 | neutral | None | None | None | None | I |
M/P | 0.7145 | likely_pathogenic | 0.7629 | pathogenic | 0.066 | Stabilizing | 0.136 | N | 0.459 | neutral | None | None | None | None | I |
M/Q | 0.2719 | likely_benign | 0.2768 | benign | 0.544 | Stabilizing | 0.136 | N | 0.285 | neutral | None | None | None | None | I |
M/R | 0.186 | likely_benign | 0.2063 | benign | 1.029 | Stabilizing | 0.106 | N | 0.445 | neutral | N | 0.438671224 | None | None | I |
M/S | 0.378 | ambiguous | 0.4363 | ambiguous | 0.246 | Stabilizing | 0.016 | N | 0.376 | neutral | None | None | None | None | I |
M/T | 0.1921 | likely_benign | 0.2322 | benign | 0.288 | Stabilizing | 0.024 | N | 0.386 | neutral | N | 0.452888528 | None | None | I |
M/V | 0.0689 | likely_benign | 0.0782 | benign | 0.066 | Stabilizing | 0.002 | N | 0.222 | neutral | N | 0.449080219 | None | None | I |
M/W | 0.6597 | likely_pathogenic | 0.6898 | pathogenic | 0.009 | Stabilizing | 0.864 | D | 0.399 | neutral | None | None | None | None | I |
M/Y | 0.5797 | likely_pathogenic | 0.6121 | pathogenic | 0.223 | Stabilizing | 0.136 | N | 0.439 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.