Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23915 | 71968;71969;71970 | chr2:178574389;178574388;178574387 | chr2:179439116;179439115;179439114 |
N2AB | 22274 | 67045;67046;67047 | chr2:178574389;178574388;178574387 | chr2:179439116;179439115;179439114 |
N2A | 21347 | 64264;64265;64266 | chr2:178574389;178574388;178574387 | chr2:179439116;179439115;179439114 |
N2B | 14850 | 44773;44774;44775 | chr2:178574389;178574388;178574387 | chr2:179439116;179439115;179439114 |
Novex-1 | 14975 | 45148;45149;45150 | chr2:178574389;178574388;178574387 | chr2:179439116;179439115;179439114 |
Novex-2 | 15042 | 45349;45350;45351 | chr2:178574389;178574388;178574387 | chr2:179439116;179439115;179439114 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.376 | N | 0.494 | 0.1 | 0.226586394389 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02444E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0602 | likely_benign | 0.0661 | benign | -1.537 | Destabilizing | 0.004 | N | 0.327 | neutral | N | 0.466337828 | None | None | I |
P/C | 0.3732 | ambiguous | 0.4102 | ambiguous | -0.928 | Destabilizing | 0.977 | D | 0.777 | deleterious | None | None | None | None | I |
P/D | 0.6777 | likely_pathogenic | 0.731 | pathogenic | -1.207 | Destabilizing | 0.848 | D | 0.54 | neutral | None | None | None | None | I |
P/E | 0.454 | ambiguous | 0.4952 | ambiguous | -1.221 | Destabilizing | 0.615 | D | 0.512 | neutral | None | None | None | None | I |
P/F | 0.487 | ambiguous | 0.5549 | ambiguous | -1.24 | Destabilizing | 0.919 | D | 0.778 | deleterious | None | None | None | None | I |
P/G | 0.3191 | likely_benign | 0.3641 | ambiguous | -1.84 | Destabilizing | 0.444 | N | 0.614 | neutral | None | None | None | None | I |
P/H | 0.315 | likely_benign | 0.3573 | ambiguous | -1.295 | Destabilizing | 0.977 | D | 0.693 | prob.delet. | None | None | None | None | I |
P/I | 0.1885 | likely_benign | 0.2062 | benign | -0.81 | Destabilizing | 0.737 | D | 0.724 | deleterious | None | None | None | None | I |
P/K | 0.5393 | ambiguous | 0.5485 | ambiguous | -1.152 | Destabilizing | 0.444 | N | 0.52 | neutral | None | None | None | None | I |
P/L | 0.1278 | likely_benign | 0.1384 | benign | -0.81 | Destabilizing | 0.376 | N | 0.689 | prob.delet. | N | 0.518246728 | None | None | I |
P/M | 0.2563 | likely_benign | 0.2766 | benign | -0.586 | Destabilizing | 0.977 | D | 0.693 | prob.delet. | None | None | None | None | I |
P/N | 0.3747 | ambiguous | 0.4307 | ambiguous | -0.887 | Destabilizing | 0.737 | D | 0.657 | prob.neutral | None | None | None | None | I |
P/Q | 0.2499 | likely_benign | 0.2665 | benign | -1.095 | Destabilizing | 0.808 | D | 0.539 | neutral | N | 0.491902122 | None | None | I |
P/R | 0.4175 | ambiguous | 0.4311 | ambiguous | -0.588 | Destabilizing | 0.808 | D | 0.678 | prob.neutral | N | 0.500042423 | None | None | I |
P/S | 0.1262 | likely_benign | 0.1425 | benign | -1.422 | Destabilizing | 0.016 | N | 0.348 | neutral | N | 0.463478292 | None | None | I |
P/T | 0.1011 | likely_benign | 0.106 | benign | -1.329 | Destabilizing | 0.376 | N | 0.494 | neutral | N | 0.494620507 | None | None | I |
P/V | 0.1286 | likely_benign | 0.1394 | benign | -1.018 | Destabilizing | 0.011 | N | 0.544 | neutral | None | None | None | None | I |
P/W | 0.7425 | likely_pathogenic | 0.7871 | pathogenic | -1.373 | Destabilizing | 0.992 | D | 0.769 | deleterious | None | None | None | None | I |
P/Y | 0.5129 | ambiguous | 0.5616 | ambiguous | -1.105 | Destabilizing | 0.972 | D | 0.775 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.