Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23925 | 71998;71999;72000 | chr2:178574359;178574358;178574357 | chr2:179439086;179439085;179439084 |
N2AB | 22284 | 67075;67076;67077 | chr2:178574359;178574358;178574357 | chr2:179439086;179439085;179439084 |
N2A | 21357 | 64294;64295;64296 | chr2:178574359;178574358;178574357 | chr2:179439086;179439085;179439084 |
N2B | 14860 | 44803;44804;44805 | chr2:178574359;178574358;178574357 | chr2:179439086;179439085;179439084 |
Novex-1 | 14985 | 45178;45179;45180 | chr2:178574359;178574358;178574357 | chr2:179439086;179439085;179439084 |
Novex-2 | 15052 | 45379;45380;45381 | chr2:178574359;178574358;178574357 | chr2:179439086;179439085;179439084 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs1401717606 | -0.74 | 0.93 | N | 0.545 | 0.146 | 0.0762999501168 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/M | rs1401717606 | -0.74 | 0.93 | N | 0.545 | 0.146 | 0.0762999501168 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/M | rs1401717606 | -0.74 | 0.93 | N | 0.545 | 0.146 | 0.0762999501168 | gnomAD-4.0.0 | 2.10725E-05 | None | None | None | None | N | None | 2.67023E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71264E-05 | 0 | 0 |
I/N | rs374887185 | -1.259 | 0.976 | N | 0.671 | 0.382 | None | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/N | rs374887185 | -1.259 | 0.976 | N | 0.671 | 0.382 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20697E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/N | rs374887185 | -1.259 | 0.976 | N | 0.671 | 0.382 | None | gnomAD-4.0.0 | 3.71871E-06 | None | None | None | None | N | None | 8.01239E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs374887185 | -1.797 | 0.651 | N | 0.579 | 0.293 | 0.317378411342 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 8.88E-06 | 0 |
I/T | rs374887185 | -1.797 | 0.651 | N | 0.579 | 0.293 | 0.317378411342 | gnomAD-4.0.0 | 6.84282E-06 | None | None | None | None | N | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 8.0959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3319 | likely_benign | 0.3685 | ambiguous | -2.341 | Highly Destabilizing | 0.338 | N | 0.495 | neutral | None | None | None | None | N |
I/C | 0.7708 | likely_pathogenic | 0.7755 | pathogenic | -1.846 | Destabilizing | 0.018 | N | 0.284 | neutral | None | None | None | None | N |
I/D | 0.9806 | likely_pathogenic | 0.9807 | pathogenic | -2.977 | Highly Destabilizing | 0.982 | D | 0.613 | neutral | None | None | None | None | N |
I/E | 0.9574 | likely_pathogenic | 0.9578 | pathogenic | -2.872 | Highly Destabilizing | 0.982 | D | 0.601 | neutral | None | None | None | None | N |
I/F | 0.7098 | likely_pathogenic | 0.6918 | pathogenic | -1.421 | Destabilizing | 0.93 | D | 0.567 | neutral | N | 0.47240729 | None | None | N |
I/G | 0.8827 | likely_pathogenic | 0.9046 | pathogenic | -2.746 | Highly Destabilizing | 0.946 | D | 0.608 | neutral | None | None | None | None | N |
I/H | 0.9738 | likely_pathogenic | 0.9725 | pathogenic | -2.001 | Highly Destabilizing | 0.995 | D | 0.604 | neutral | None | None | None | None | N |
I/K | 0.9491 | likely_pathogenic | 0.9429 | pathogenic | -1.719 | Destabilizing | 0.982 | D | 0.598 | neutral | None | None | None | None | N |
I/L | 0.2328 | likely_benign | 0.2413 | benign | -1.213 | Destabilizing | 0.144 | N | 0.37 | neutral | N | 0.467980119 | None | None | N |
I/M | 0.1838 | likely_benign | 0.1864 | benign | -1.231 | Destabilizing | 0.93 | D | 0.545 | neutral | N | 0.460830221 | None | None | N |
I/N | 0.8307 | likely_pathogenic | 0.8256 | pathogenic | -1.865 | Destabilizing | 0.976 | D | 0.671 | prob.neutral | N | 0.472440016 | None | None | N |
I/P | 0.864 | likely_pathogenic | 0.8328 | pathogenic | -1.568 | Destabilizing | 0.982 | D | 0.672 | prob.neutral | None | None | None | None | N |
I/Q | 0.9383 | likely_pathogenic | 0.9345 | pathogenic | -1.947 | Destabilizing | 0.982 | D | 0.63 | neutral | None | None | None | None | N |
I/R | 0.9233 | likely_pathogenic | 0.9183 | pathogenic | -1.223 | Destabilizing | 0.982 | D | 0.661 | prob.neutral | None | None | None | None | N |
I/S | 0.5955 | likely_pathogenic | 0.6206 | pathogenic | -2.422 | Highly Destabilizing | 0.651 | D | 0.458 | neutral | N | 0.453068313 | None | None | N |
I/T | 0.19 | likely_benign | 0.2082 | benign | -2.204 | Highly Destabilizing | 0.651 | D | 0.579 | neutral | N | 0.511866969 | None | None | N |
I/V | 0.0579 | likely_benign | 0.0641 | benign | -1.568 | Destabilizing | 0.003 | N | 0.083 | neutral | N | 0.426557571 | None | None | N |
I/W | 0.9907 | likely_pathogenic | 0.9895 | pathogenic | -1.692 | Destabilizing | 0.995 | D | 0.658 | prob.neutral | None | None | None | None | N |
I/Y | 0.9674 | likely_pathogenic | 0.9614 | pathogenic | -1.484 | Destabilizing | 0.982 | D | 0.597 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.