Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23934 | 72025;72026;72027 | chr2:178574332;178574331;178574330 | chr2:179439059;179439058;179439057 |
N2AB | 22293 | 67102;67103;67104 | chr2:178574332;178574331;178574330 | chr2:179439059;179439058;179439057 |
N2A | 21366 | 64321;64322;64323 | chr2:178574332;178574331;178574330 | chr2:179439059;179439058;179439057 |
N2B | 14869 | 44830;44831;44832 | chr2:178574332;178574331;178574330 | chr2:179439059;179439058;179439057 |
Novex-1 | 14994 | 45205;45206;45207 | chr2:178574332;178574331;178574330 | chr2:179439059;179439058;179439057 |
Novex-2 | 15061 | 45406;45407;45408 | chr2:178574332;178574331;178574330 | chr2:179439059;179439058;179439057 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs1465413205 | None | 0.76 | N | 0.435 | 0.092 | 0.250579442822 | gnomAD-4.0.0 | 1.36858E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15955E-05 | 1.65673E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1989 | likely_benign | 0.2239 | benign | -1.114 | Destabilizing | 0.953 | D | 0.531 | neutral | None | None | None | None | N |
L/C | 0.4321 | ambiguous | 0.4622 | ambiguous | -0.7 | Destabilizing | 0.999 | D | 0.656 | neutral | None | None | None | None | N |
L/D | 0.6501 | likely_pathogenic | 0.7089 | pathogenic | -0.526 | Destabilizing | 0.993 | D | 0.745 | deleterious | None | None | None | None | N |
L/E | 0.2688 | likely_benign | 0.3113 | benign | -0.566 | Destabilizing | 0.993 | D | 0.74 | deleterious | None | None | None | None | N |
L/F | 0.1374 | likely_benign | 0.1538 | benign | -0.795 | Destabilizing | 0.986 | D | 0.603 | neutral | None | None | None | None | N |
L/G | 0.4708 | ambiguous | 0.52 | ambiguous | -1.369 | Destabilizing | 0.993 | D | 0.744 | deleterious | None | None | None | None | N |
L/H | 0.2157 | likely_benign | 0.2506 | benign | -0.51 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/I | 0.0693 | likely_benign | 0.0727 | benign | -0.523 | Destabilizing | 0.1 | N | 0.197 | neutral | N | 0.443213039 | None | None | N |
L/K | 0.2512 | likely_benign | 0.2767 | benign | -0.722 | Destabilizing | 0.993 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/M | 0.1056 | likely_benign | 0.1128 | benign | -0.482 | Destabilizing | 0.986 | D | 0.593 | neutral | None | None | None | None | N |
L/N | 0.3496 | ambiguous | 0.3962 | ambiguous | -0.517 | Destabilizing | 0.993 | D | 0.746 | deleterious | None | None | None | None | N |
L/P | 0.8352 | likely_pathogenic | 0.847 | pathogenic | -0.687 | Destabilizing | 0.997 | D | 0.748 | deleterious | N | 0.473192437 | None | None | N |
L/Q | 0.1275 | likely_benign | 0.141 | benign | -0.714 | Destabilizing | 0.997 | D | 0.716 | prob.delet. | N | 0.503434778 | None | None | N |
L/R | 0.1856 | likely_benign | 0.2088 | benign | -0.113 | Destabilizing | 0.991 | D | 0.719 | prob.delet. | N | 0.46664507 | None | None | N |
L/S | 0.2229 | likely_benign | 0.2594 | benign | -1.053 | Destabilizing | 0.973 | D | 0.625 | neutral | None | None | None | None | N |
L/T | 0.1551 | likely_benign | 0.1654 | benign | -0.978 | Destabilizing | 0.386 | N | 0.251 | neutral | None | None | None | None | N |
L/V | 0.0687 | likely_benign | 0.0721 | benign | -0.687 | Destabilizing | 0.76 | D | 0.435 | neutral | N | 0.427763584 | None | None | N |
L/W | 0.2893 | likely_benign | 0.3312 | benign | -0.826 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/Y | 0.3449 | ambiguous | 0.3901 | ambiguous | -0.603 | Destabilizing | 0.998 | D | 0.698 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.