Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23966 | 72121;72122;72123 | chr2:178574236;178574235;178574234 | chr2:179438963;179438962;179438961 |
N2AB | 22325 | 67198;67199;67200 | chr2:178574236;178574235;178574234 | chr2:179438963;179438962;179438961 |
N2A | 21398 | 64417;64418;64419 | chr2:178574236;178574235;178574234 | chr2:179438963;179438962;179438961 |
N2B | 14901 | 44926;44927;44928 | chr2:178574236;178574235;178574234 | chr2:179438963;179438962;179438961 |
Novex-1 | 15026 | 45301;45302;45303 | chr2:178574236;178574235;178574234 | chr2:179438963;179438962;179438961 |
Novex-2 | 15093 | 45502;45503;45504 | chr2:178574236;178574235;178574234 | chr2:179438963;179438962;179438961 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.99 | N | 0.736 | 0.512 | 0.773781150904 | gnomAD-4.0.0 | 1.59242E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78319E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5589 | ambiguous | 0.5883 | pathogenic | -1.753 | Destabilizing | 0.86 | D | 0.555 | neutral | None | None | None | None | N |
L/C | 0.722 | likely_pathogenic | 0.7632 | pathogenic | -0.865 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | N |
L/D | 0.9399 | likely_pathogenic | 0.9472 | pathogenic | -1.305 | Destabilizing | 0.993 | D | 0.742 | deleterious | None | None | None | None | N |
L/E | 0.7562 | likely_pathogenic | 0.7968 | pathogenic | -1.34 | Destabilizing | 0.993 | D | 0.746 | deleterious | None | None | None | None | N |
L/F | 0.3429 | ambiguous | 0.3644 | ambiguous | -1.395 | Destabilizing | 0.032 | N | 0.274 | neutral | N | 0.485802963 | None | None | N |
L/G | 0.8231 | likely_pathogenic | 0.8369 | pathogenic | -2.042 | Highly Destabilizing | 0.978 | D | 0.746 | deleterious | None | None | None | None | N |
L/H | 0.5116 | ambiguous | 0.5641 | pathogenic | -1.252 | Destabilizing | 0.997 | D | 0.719 | prob.delet. | N | 0.467191729 | None | None | N |
L/I | 0.1058 | likely_benign | 0.1178 | benign | -1.038 | Destabilizing | 0.698 | D | 0.507 | neutral | N | 0.50280006 | None | None | N |
L/K | 0.5234 | ambiguous | 0.5669 | pathogenic | -1.123 | Destabilizing | 0.978 | D | 0.711 | prob.delet. | None | None | None | None | N |
L/M | 0.1963 | likely_benign | 0.207 | benign | -0.666 | Destabilizing | 0.356 | N | 0.209 | neutral | None | None | None | None | N |
L/N | 0.6912 | likely_pathogenic | 0.7051 | pathogenic | -0.826 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/P | 0.8944 | likely_pathogenic | 0.8972 | pathogenic | -1.246 | Destabilizing | 0.99 | D | 0.736 | prob.delet. | N | 0.504050854 | None | None | N |
L/Q | 0.4159 | ambiguous | 0.4557 | ambiguous | -1.093 | Destabilizing | 0.978 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/R | 0.439 | ambiguous | 0.5058 | ambiguous | -0.441 | Destabilizing | 0.971 | D | 0.705 | prob.neutral | N | 0.469064607 | None | None | N |
L/S | 0.6342 | likely_pathogenic | 0.6709 | pathogenic | -1.384 | Destabilizing | 0.978 | D | 0.688 | prob.neutral | None | None | None | None | N |
L/T | 0.5101 | ambiguous | 0.5436 | ambiguous | -1.315 | Destabilizing | 0.978 | D | 0.583 | neutral | None | None | None | None | N |
L/V | 0.1426 | likely_benign | 0.1559 | benign | -1.246 | Destabilizing | 0.698 | D | 0.524 | neutral | N | 0.454910113 | None | None | N |
L/W | 0.6356 | likely_pathogenic | 0.6802 | pathogenic | -1.42 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
L/Y | 0.5946 | likely_pathogenic | 0.6355 | pathogenic | -1.228 | Destabilizing | 0.915 | D | 0.632 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.