Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2396672121;72122;72123 chr2:178574236;178574235;178574234chr2:179438963;179438962;179438961
N2AB2232567198;67199;67200 chr2:178574236;178574235;178574234chr2:179438963;179438962;179438961
N2A2139864417;64418;64419 chr2:178574236;178574235;178574234chr2:179438963;179438962;179438961
N2B1490144926;44927;44928 chr2:178574236;178574235;178574234chr2:179438963;179438962;179438961
Novex-11502645301;45302;45303 chr2:178574236;178574235;178574234chr2:179438963;179438962;179438961
Novex-21509345502;45503;45504 chr2:178574236;178574235;178574234chr2:179438963;179438962;179438961
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-62
  • Domain position: 43
  • Structural Position: 50
  • Q(SASA): 0.2146
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P None None 0.99 N 0.736 0.512 0.773781150904 gnomAD-4.0.0 1.59242E-06 None None None None N None 0 0 None 0 2.78319E-05 None 0 0 0 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.5589 ambiguous 0.5883 pathogenic -1.753 Destabilizing 0.86 D 0.555 neutral None None None None N
L/C 0.722 likely_pathogenic 0.7632 pathogenic -0.865 Destabilizing 0.998 D 0.625 neutral None None None None N
L/D 0.9399 likely_pathogenic 0.9472 pathogenic -1.305 Destabilizing 0.993 D 0.742 deleterious None None None None N
L/E 0.7562 likely_pathogenic 0.7968 pathogenic -1.34 Destabilizing 0.993 D 0.746 deleterious None None None None N
L/F 0.3429 ambiguous 0.3644 ambiguous -1.395 Destabilizing 0.032 N 0.274 neutral N 0.485802963 None None N
L/G 0.8231 likely_pathogenic 0.8369 pathogenic -2.042 Highly Destabilizing 0.978 D 0.746 deleterious None None None None N
L/H 0.5116 ambiguous 0.5641 pathogenic -1.252 Destabilizing 0.997 D 0.719 prob.delet. N 0.467191729 None None N
L/I 0.1058 likely_benign 0.1178 benign -1.038 Destabilizing 0.698 D 0.507 neutral N 0.50280006 None None N
L/K 0.5234 ambiguous 0.5669 pathogenic -1.123 Destabilizing 0.978 D 0.711 prob.delet. None None None None N
L/M 0.1963 likely_benign 0.207 benign -0.666 Destabilizing 0.356 N 0.209 neutral None None None None N
L/N 0.6912 likely_pathogenic 0.7051 pathogenic -0.826 Destabilizing 0.993 D 0.739 prob.delet. None None None None N
L/P 0.8944 likely_pathogenic 0.8972 pathogenic -1.246 Destabilizing 0.99 D 0.736 prob.delet. N 0.504050854 None None N
L/Q 0.4159 ambiguous 0.4557 ambiguous -1.093 Destabilizing 0.978 D 0.712 prob.delet. None None None None N
L/R 0.439 ambiguous 0.5058 ambiguous -0.441 Destabilizing 0.971 D 0.705 prob.neutral N 0.469064607 None None N
L/S 0.6342 likely_pathogenic 0.6709 pathogenic -1.384 Destabilizing 0.978 D 0.688 prob.neutral None None None None N
L/T 0.5101 ambiguous 0.5436 ambiguous -1.315 Destabilizing 0.978 D 0.583 neutral None None None None N
L/V 0.1426 likely_benign 0.1559 benign -1.246 Destabilizing 0.698 D 0.524 neutral N 0.454910113 None None N
L/W 0.6356 likely_pathogenic 0.6802 pathogenic -1.42 Destabilizing 0.998 D 0.709 prob.delet. None None None None N
L/Y 0.5946 likely_pathogenic 0.6355 pathogenic -1.228 Destabilizing 0.915 D 0.632 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.