Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23983 | 72172;72173;72174 | chr2:178574185;178574184;178574183 | chr2:179438912;179438911;179438910 |
N2AB | 22342 | 67249;67250;67251 | chr2:178574185;178574184;178574183 | chr2:179438912;179438911;179438910 |
N2A | 21415 | 64468;64469;64470 | chr2:178574185;178574184;178574183 | chr2:179438912;179438911;179438910 |
N2B | 14918 | 44977;44978;44979 | chr2:178574185;178574184;178574183 | chr2:179438912;179438911;179438910 |
Novex-1 | 15043 | 45352;45353;45354 | chr2:178574185;178574184;178574183 | chr2:179438912;179438911;179438910 |
Novex-2 | 15110 | 45553;45554;45555 | chr2:178574185;178574184;178574183 | chr2:179438912;179438911;179438910 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1299777918 | None | 0.642 | N | 0.505 | 0.211 | 0.318828661733 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
E/G | rs1299777918 | None | 0.642 | N | 0.505 | 0.211 | 0.318828661733 | gnomAD-4.0.0 | 6.40763E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.19693E-05 | 0 | 0 |
E/K | None | None | 0.27 | N | 0.367 | 0.24 | 0.201204373187 | gnomAD-4.0.0 | 1.36864E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79913E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1494 | likely_benign | 0.1733 | benign | -0.712 | Destabilizing | 0.425 | N | 0.423 | neutral | N | 0.461414798 | None | None | N |
E/C | 0.7437 | likely_pathogenic | 0.7724 | pathogenic | -0.437 | Destabilizing | 0.995 | D | 0.581 | neutral | None | None | None | None | N |
E/D | 0.2062 | likely_benign | 0.2207 | benign | -1.059 | Destabilizing | 0.27 | N | 0.377 | neutral | N | 0.507976594 | None | None | N |
E/F | 0.6695 | likely_pathogenic | 0.7093 | pathogenic | 0.127 | Stabilizing | 0.893 | D | 0.6 | neutral | None | None | None | None | N |
E/G | 0.2365 | likely_benign | 0.2716 | benign | -1.12 | Destabilizing | 0.642 | D | 0.505 | neutral | N | 0.509515389 | None | None | N |
E/H | 0.3782 | ambiguous | 0.3955 | ambiguous | -0.052 | Destabilizing | 0.944 | D | 0.501 | neutral | None | None | None | None | N |
E/I | 0.2594 | likely_benign | 0.2821 | benign | 0.416 | Stabilizing | 0.031 | N | 0.514 | neutral | None | None | None | None | N |
E/K | 0.1667 | likely_benign | 0.1699 | benign | -0.559 | Destabilizing | 0.27 | N | 0.367 | neutral | N | 0.485465093 | None | None | N |
E/L | 0.4112 | ambiguous | 0.4459 | ambiguous | 0.416 | Stabilizing | 0.329 | N | 0.479 | neutral | None | None | None | None | N |
E/M | 0.3711 | ambiguous | 0.4116 | ambiguous | 0.781 | Stabilizing | 0.176 | N | 0.454 | neutral | None | None | None | None | N |
E/N | 0.2443 | likely_benign | 0.2745 | benign | -1.172 | Destabilizing | 0.031 | N | 0.369 | neutral | None | None | None | None | N |
E/P | 0.955 | likely_pathogenic | 0.9625 | pathogenic | 0.062 | Stabilizing | 0.944 | D | 0.585 | neutral | None | None | None | None | N |
E/Q | 0.1227 | likely_benign | 0.1263 | benign | -0.984 | Destabilizing | 0.023 | N | 0.329 | neutral | N | 0.438519295 | None | None | N |
E/R | 0.2724 | likely_benign | 0.2796 | benign | -0.192 | Destabilizing | 0.543 | D | 0.424 | neutral | None | None | None | None | N |
E/S | 0.1678 | likely_benign | 0.1868 | benign | -1.514 | Destabilizing | 0.329 | N | 0.381 | neutral | None | None | None | None | N |
E/T | 0.1508 | likely_benign | 0.1685 | benign | -1.165 | Destabilizing | 0.031 | N | 0.334 | neutral | None | None | None | None | N |
E/V | 0.1689 | likely_benign | 0.1901 | benign | 0.062 | Stabilizing | 0.27 | N | 0.462 | neutral | N | 0.516961436 | None | None | N |
E/W | 0.892 | likely_pathogenic | 0.911 | pathogenic | 0.419 | Stabilizing | 0.995 | D | 0.604 | neutral | None | None | None | None | N |
E/Y | 0.5146 | ambiguous | 0.5546 | ambiguous | 0.403 | Stabilizing | 0.981 | D | 0.601 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.