Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23987 | 72184;72185;72186 | chr2:178574173;178574172;178574171 | chr2:179438900;179438899;179438898 |
N2AB | 22346 | 67261;67262;67263 | chr2:178574173;178574172;178574171 | chr2:179438900;179438899;179438898 |
N2A | 21419 | 64480;64481;64482 | chr2:178574173;178574172;178574171 | chr2:179438900;179438899;179438898 |
N2B | 14922 | 44989;44990;44991 | chr2:178574173;178574172;178574171 | chr2:179438900;179438899;179438898 |
Novex-1 | 15047 | 45364;45365;45366 | chr2:178574173;178574172;178574171 | chr2:179438900;179438899;179438898 |
Novex-2 | 15114 | 45565;45566;45567 | chr2:178574173;178574172;178574171 | chr2:179438900;179438899;179438898 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs764752985 | -0.298 | 0.17 | N | 0.325 | 0.129 | 0.110078149338 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1018 | likely_benign | 0.1033 | benign | -0.268 | Destabilizing | 0.807 | D | 0.349 | neutral | None | None | None | None | N |
S/C | 0.2017 | likely_benign | 0.2088 | benign | -0.302 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.474499564 | None | None | N |
S/D | 0.6259 | likely_pathogenic | 0.6418 | pathogenic | 0.399 | Stabilizing | 0.953 | D | 0.517 | neutral | None | None | None | None | N |
S/E | 0.7262 | likely_pathogenic | 0.7248 | pathogenic | 0.308 | Stabilizing | 0.953 | D | 0.521 | neutral | None | None | None | None | N |
S/F | 0.3247 | likely_benign | 0.3396 | benign | -0.892 | Destabilizing | 0.993 | D | 0.783 | deleterious | None | None | None | None | N |
S/G | 0.1141 | likely_benign | 0.1183 | benign | -0.367 | Destabilizing | 0.939 | D | 0.429 | neutral | N | 0.484158371 | None | None | N |
S/H | 0.5728 | likely_pathogenic | 0.5741 | pathogenic | -0.782 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
S/I | 0.2895 | likely_benign | 0.2938 | benign | -0.14 | Destabilizing | 0.982 | D | 0.775 | deleterious | N | 0.507843308 | None | None | N |
S/K | 0.8548 | likely_pathogenic | 0.8663 | pathogenic | -0.312 | Destabilizing | 0.953 | D | 0.514 | neutral | None | None | None | None | N |
S/L | 0.1193 | likely_benign | 0.1216 | benign | -0.14 | Destabilizing | 0.91 | D | 0.625 | neutral | None | None | None | None | N |
S/M | 0.2501 | likely_benign | 0.2426 | benign | -0.066 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
S/N | 0.2123 | likely_benign | 0.2113 | benign | -0.08 | Destabilizing | 0.939 | D | 0.507 | neutral | N | 0.502877418 | None | None | N |
S/P | 0.2405 | likely_benign | 0.2401 | benign | -0.154 | Destabilizing | 0.993 | D | 0.765 | deleterious | None | None | None | None | N |
S/Q | 0.702 | likely_pathogenic | 0.694 | pathogenic | -0.285 | Destabilizing | 0.993 | D | 0.643 | neutral | None | None | None | None | N |
S/R | 0.8239 | likely_pathogenic | 0.845 | pathogenic | -0.134 | Destabilizing | 0.991 | D | 0.779 | deleterious | N | 0.489852193 | None | None | N |
S/T | 0.0742 | likely_benign | 0.0742 | benign | -0.2 | Destabilizing | 0.17 | N | 0.325 | neutral | N | 0.36908064 | None | None | N |
S/V | 0.2837 | likely_benign | 0.2815 | benign | -0.154 | Destabilizing | 0.973 | D | 0.692 | prob.neutral | None | None | None | None | N |
S/W | 0.5296 | ambiguous | 0.5498 | ambiguous | -0.926 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
S/Y | 0.3162 | likely_benign | 0.3292 | benign | -0.615 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.