Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23996 | 72211;72212;72213 | chr2:178574146;178574145;178574144 | chr2:179438873;179438872;179438871 |
N2AB | 22355 | 67288;67289;67290 | chr2:178574146;178574145;178574144 | chr2:179438873;179438872;179438871 |
N2A | 21428 | 64507;64508;64509 | chr2:178574146;178574145;178574144 | chr2:179438873;179438872;179438871 |
N2B | 14931 | 45016;45017;45018 | chr2:178574146;178574145;178574144 | chr2:179438873;179438872;179438871 |
Novex-1 | 15056 | 45391;45392;45393 | chr2:178574146;178574145;178574144 | chr2:179438873;179438872;179438871 |
Novex-2 | 15123 | 45592;45593;45594 | chr2:178574146;178574145;178574144 | chr2:179438873;179438872;179438871 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs769265681 | -1.241 | 0.999 | N | 0.655 | 0.582 | 0.484691182572 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
E/A | rs769265681 | -1.241 | 0.999 | N | 0.655 | 0.582 | 0.484691182572 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8591E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3768 | ambiguous | 0.4171 | ambiguous | -0.52 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.485095401 | None | None | N |
E/C | 0.9232 | likely_pathogenic | 0.9231 | pathogenic | 0.118 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/D | 0.6749 | likely_pathogenic | 0.7203 | pathogenic | -1.351 | Destabilizing | 0.999 | D | 0.547 | neutral | N | 0.520407173 | None | None | N |
E/F | 0.9553 | likely_pathogenic | 0.9559 | pathogenic | -0.041 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/G | 0.6923 | likely_pathogenic | 0.7233 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.517380345 | None | None | N |
E/H | 0.8663 | likely_pathogenic | 0.8727 | pathogenic | -0.077 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/I | 0.6763 | likely_pathogenic | 0.6712 | pathogenic | 0.788 | Stabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/K | 0.6057 | likely_pathogenic | 0.6294 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.599 | neutral | D | 0.524138125 | None | None | N |
E/L | 0.8058 | likely_pathogenic | 0.8034 | pathogenic | 0.788 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/M | 0.715 | likely_pathogenic | 0.7221 | pathogenic | 1.414 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/N | 0.7909 | likely_pathogenic | 0.8191 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/P | 0.9972 | likely_pathogenic | 0.9972 | pathogenic | 0.371 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Q | 0.2203 | likely_benign | 0.2246 | benign | -0.557 | Destabilizing | 1.0 | D | 0.668 | neutral | N | 0.514614564 | None | None | N |
E/R | 0.7246 | likely_pathogenic | 0.7369 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/S | 0.4998 | ambiguous | 0.5404 | ambiguous | -1.5 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
E/T | 0.5734 | likely_pathogenic | 0.6095 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/V | 0.4762 | ambiguous | 0.4831 | ambiguous | 0.371 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.515961359 | None | None | N |
E/W | 0.9907 | likely_pathogenic | 0.9912 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/Y | 0.9315 | likely_pathogenic | 0.9323 | pathogenic | 0.214 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.