Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24000 | 72223;72224;72225 | chr2:178574134;178574133;178574132 | chr2:179438861;179438860;179438859 |
N2AB | 22359 | 67300;67301;67302 | chr2:178574134;178574133;178574132 | chr2:179438861;179438860;179438859 |
N2A | 21432 | 64519;64520;64521 | chr2:178574134;178574133;178574132 | chr2:179438861;179438860;179438859 |
N2B | 14935 | 45028;45029;45030 | chr2:178574134;178574133;178574132 | chr2:179438861;179438860;179438859 |
Novex-1 | 15060 | 45403;45404;45405 | chr2:178574134;178574133;178574132 | chr2:179438861;179438860;179438859 |
Novex-2 | 15127 | 45604;45605;45606 | chr2:178574134;178574133;178574132 | chr2:179438861;179438860;179438859 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs1053083187 | None | 0.852 | N | 0.739 | 0.293 | 0.591849201417 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/S | rs1053083187 | None | 0.852 | N | 0.739 | 0.293 | 0.591849201417 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47076E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.285 | likely_benign | 0.3721 | ambiguous | -2.772 | Highly Destabilizing | 0.863 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/C | 0.6839 | likely_pathogenic | 0.7418 | pathogenic | -2.061 | Highly Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
I/D | 0.9302 | likely_pathogenic | 0.9525 | pathogenic | -3.306 | Highly Destabilizing | 0.991 | D | 0.783 | deleterious | None | None | None | None | N |
I/E | 0.7968 | likely_pathogenic | 0.8417 | pathogenic | -3.129 | Highly Destabilizing | 0.991 | D | 0.783 | deleterious | None | None | None | None | N |
I/F | 0.1177 | likely_benign | 0.1247 | benign | -1.629 | Destabilizing | 0.035 | N | 0.437 | neutral | N | 0.465724539 | None | None | N |
I/G | 0.7607 | likely_pathogenic | 0.8316 | pathogenic | -3.241 | Highly Destabilizing | 0.969 | D | 0.761 | deleterious | None | None | None | None | N |
I/H | 0.5682 | likely_pathogenic | 0.6123 | pathogenic | -2.602 | Highly Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
I/K | 0.4606 | ambiguous | 0.5256 | ambiguous | -2.179 | Highly Destabilizing | 0.991 | D | 0.777 | deleterious | None | None | None | None | N |
I/L | 0.1012 | likely_benign | 0.1066 | benign | -1.417 | Destabilizing | 0.005 | N | 0.192 | neutral | N | 0.477421613 | None | None | N |
I/M | 0.0785 | likely_benign | 0.0859 | benign | -1.401 | Destabilizing | 0.99 | D | 0.743 | deleterious | N | 0.473521605 | None | None | N |
I/N | 0.533 | ambiguous | 0.6061 | pathogenic | -2.431 | Highly Destabilizing | 0.988 | D | 0.795 | deleterious | N | 0.50328488 | None | None | N |
I/P | 0.9784 | likely_pathogenic | 0.9861 | pathogenic | -1.852 | Destabilizing | 0.997 | D | 0.795 | deleterious | None | None | None | None | N |
I/Q | 0.5318 | ambiguous | 0.5754 | pathogenic | -2.374 | Highly Destabilizing | 0.997 | D | 0.799 | deleterious | None | None | None | None | N |
I/R | 0.3133 | likely_benign | 0.3669 | ambiguous | -1.733 | Destabilizing | 0.991 | D | 0.791 | deleterious | None | None | None | None | N |
I/S | 0.3167 | likely_benign | 0.3872 | ambiguous | -3.03 | Highly Destabilizing | 0.852 | D | 0.739 | prob.delet. | N | 0.472477153 | None | None | N |
I/T | 0.1289 | likely_benign | 0.164 | benign | -2.737 | Highly Destabilizing | 0.134 | N | 0.474 | neutral | N | 0.473669232 | None | None | N |
I/V | 0.0969 | likely_benign | 0.1114 | benign | -1.852 | Destabilizing | 0.509 | D | 0.371 | neutral | N | 0.491350916 | None | None | N |
I/W | 0.7009 | likely_pathogenic | 0.74 | pathogenic | -2.015 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
I/Y | 0.4916 | ambiguous | 0.5213 | ambiguous | -1.821 | Destabilizing | 0.964 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.