Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24033 | 72322;72323;72324 | chr2:178574035;178574034;178574033 | chr2:179438762;179438761;179438760 |
N2AB | 22392 | 67399;67400;67401 | chr2:178574035;178574034;178574033 | chr2:179438762;179438761;179438760 |
N2A | 21465 | 64618;64619;64620 | chr2:178574035;178574034;178574033 | chr2:179438762;179438761;179438760 |
N2B | 14968 | 45127;45128;45129 | chr2:178574035;178574034;178574033 | chr2:179438762;179438761;179438760 |
Novex-1 | 15093 | 45502;45503;45504 | chr2:178574035;178574034;178574033 | chr2:179438762;179438761;179438760 |
Novex-2 | 15160 | 45703;45704;45705 | chr2:178574035;178574034;178574033 | chr2:179438762;179438761;179438760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs771227294 | None | None | N | 0.273 | 0.086 | 0.273503213844 | gnomAD-4.0.0 | 1.59202E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1017 | likely_benign | 0.1124 | benign | -0.651 | Destabilizing | None | N | 0.17 | neutral | N | 0.426289078 | None | None | N |
V/C | 0.6522 | likely_pathogenic | 0.6614 | pathogenic | -0.577 | Destabilizing | 0.356 | N | 0.367 | neutral | None | None | None | None | N |
V/D | 0.185 | likely_benign | 0.197 | benign | -0.632 | Destabilizing | 0.055 | N | 0.391 | neutral | N | 0.457652135 | None | None | N |
V/E | 0.1905 | likely_benign | 0.1955 | benign | -0.729 | Destabilizing | 0.072 | N | 0.339 | neutral | None | None | None | None | N |
V/F | 0.166 | likely_benign | 0.1854 | benign | -0.806 | Destabilizing | 0.171 | N | 0.439 | neutral | N | 0.47995143 | None | None | N |
V/G | 0.1299 | likely_benign | 0.1403 | benign | -0.803 | Destabilizing | 0.012 | N | 0.349 | neutral | N | 0.489897839 | None | None | N |
V/H | 0.4415 | ambiguous | 0.4597 | ambiguous | -0.348 | Destabilizing | 0.628 | D | 0.41 | neutral | None | None | None | None | N |
V/I | 0.0772 | likely_benign | 0.0825 | benign | -0.387 | Destabilizing | None | N | 0.273 | neutral | N | 0.500152118 | None | None | N |
V/K | 0.2576 | likely_benign | 0.2552 | benign | -0.646 | Destabilizing | 0.072 | N | 0.354 | neutral | None | None | None | None | N |
V/L | 0.1429 | likely_benign | 0.1558 | benign | -0.387 | Destabilizing | 0.002 | N | 0.231 | neutral | N | 0.459921649 | None | None | N |
V/M | 0.1215 | likely_benign | 0.1327 | benign | -0.436 | Destabilizing | 0.214 | N | 0.359 | neutral | None | None | None | None | N |
V/N | 0.1722 | likely_benign | 0.1845 | benign | -0.372 | Destabilizing | 0.072 | N | 0.467 | neutral | None | None | None | None | N |
V/P | 0.194 | likely_benign | 0.1985 | benign | -0.441 | Destabilizing | None | N | 0.265 | neutral | None | None | None | None | N |
V/Q | 0.2477 | likely_benign | 0.2565 | benign | -0.611 | Destabilizing | 0.356 | N | 0.475 | neutral | None | None | None | None | N |
V/R | 0.2477 | likely_benign | 0.2449 | benign | -0.087 | Destabilizing | 0.214 | N | 0.498 | neutral | None | None | None | None | N |
V/S | 0.1281 | likely_benign | 0.1338 | benign | -0.685 | Destabilizing | 0.001 | N | 0.245 | neutral | None | None | None | None | N |
V/T | 0.1394 | likely_benign | 0.1481 | benign | -0.687 | Destabilizing | 0.031 | N | 0.301 | neutral | None | None | None | None | N |
V/W | 0.6827 | likely_pathogenic | 0.6999 | pathogenic | -0.913 | Destabilizing | 0.864 | D | 0.427 | neutral | None | None | None | None | N |
V/Y | 0.4028 | ambiguous | 0.4276 | ambiguous | -0.625 | Destabilizing | 0.356 | N | 0.411 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.