Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24040 | 72343;72344;72345 | chr2:178574014;178574013;178574012 | chr2:179438741;179438740;179438739 |
N2AB | 22399 | 67420;67421;67422 | chr2:178574014;178574013;178574012 | chr2:179438741;179438740;179438739 |
N2A | 21472 | 64639;64640;64641 | chr2:178574014;178574013;178574012 | chr2:179438741;179438740;179438739 |
N2B | 14975 | 45148;45149;45150 | chr2:178574014;178574013;178574012 | chr2:179438741;179438740;179438739 |
Novex-1 | 15100 | 45523;45524;45525 | chr2:178574014;178574013;178574012 | chr2:179438741;179438740;179438739 |
Novex-2 | 15167 | 45724;45725;45726 | chr2:178574014;178574013;178574012 | chr2:179438741;179438740;179438739 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.002 | N | 0.224 | 0.115 | 0.405012372841 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/T | None | None | None | N | 0.163 | 0.126 | 0.270889551736 | gnomAD-4.0.0 | 1.36874E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79916E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2428 | likely_benign | 0.295 | benign | -0.998 | Destabilizing | 0.007 | N | 0.268 | neutral | None | None | None | None | I |
I/C | 0.4971 | ambiguous | 0.5574 | ambiguous | -0.814 | Destabilizing | 0.356 | N | 0.305 | neutral | None | None | None | None | I |
I/D | 0.5532 | ambiguous | 0.6236 | pathogenic | -0.175 | Destabilizing | 0.072 | N | 0.414 | neutral | None | None | None | None | I |
I/E | 0.4268 | ambiguous | 0.4692 | ambiguous | -0.202 | Destabilizing | 0.072 | N | 0.416 | neutral | None | None | None | None | I |
I/F | 0.1201 | likely_benign | 0.1372 | benign | -0.634 | Destabilizing | 0.072 | N | 0.273 | neutral | None | None | None | None | I |
I/G | 0.5197 | ambiguous | 0.6033 | pathogenic | -1.253 | Destabilizing | 0.072 | N | 0.397 | neutral | None | None | None | None | I |
I/H | 0.3383 | likely_benign | 0.3643 | ambiguous | -0.381 | Destabilizing | 0.864 | D | 0.341 | neutral | None | None | None | None | I |
I/K | 0.3069 | likely_benign | 0.3251 | benign | -0.648 | Destabilizing | 0.055 | N | 0.439 | neutral | N | 0.459289717 | None | None | I |
I/L | 0.0809 | likely_benign | 0.0883 | benign | -0.411 | Destabilizing | 0.002 | N | 0.224 | neutral | N | 0.458329712 | None | None | I |
I/M | 0.0938 | likely_benign | 0.1026 | benign | -0.487 | Destabilizing | 0.295 | N | 0.282 | neutral | N | 0.48632439 | None | None | I |
I/N | 0.1882 | likely_benign | 0.2105 | benign | -0.538 | Destabilizing | 0.214 | N | 0.429 | neutral | None | None | None | None | I |
I/P | 0.5818 | likely_pathogenic | 0.6619 | pathogenic | -0.573 | Destabilizing | 0.356 | N | 0.429 | neutral | None | None | None | None | I |
I/Q | 0.3057 | likely_benign | 0.3256 | benign | -0.675 | Destabilizing | 0.356 | N | 0.373 | neutral | None | None | None | None | I |
I/R | 0.2398 | likely_benign | 0.2573 | benign | -0.118 | Destabilizing | 0.171 | N | 0.407 | neutral | N | 0.441109388 | None | None | I |
I/S | 0.1902 | likely_benign | 0.219 | benign | -1.118 | Destabilizing | 0.016 | N | 0.317 | neutral | None | None | None | None | I |
I/T | 0.105 | likely_benign | 0.1239 | benign | -1.025 | Destabilizing | None | N | 0.163 | neutral | N | 0.395625028 | None | None | I |
I/V | 0.0643 | likely_benign | 0.0691 | benign | -0.573 | Destabilizing | None | N | 0.133 | neutral | N | 0.36809171 | None | None | I |
I/W | 0.6682 | likely_pathogenic | 0.717 | pathogenic | -0.672 | Destabilizing | 0.864 | D | 0.356 | neutral | None | None | None | None | I |
I/Y | 0.3682 | ambiguous | 0.3797 | ambiguous | -0.442 | Destabilizing | 0.356 | N | 0.346 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.