Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24041 | 72346;72347;72348 | chr2:178574011;178574010;178574009 | chr2:179438738;179438737;179438736 |
N2AB | 22400 | 67423;67424;67425 | chr2:178574011;178574010;178574009 | chr2:179438738;179438737;179438736 |
N2A | 21473 | 64642;64643;64644 | chr2:178574011;178574010;178574009 | chr2:179438738;179438737;179438736 |
N2B | 14976 | 45151;45152;45153 | chr2:178574011;178574010;178574009 | chr2:179438738;179438737;179438736 |
Novex-1 | 15101 | 45526;45527;45528 | chr2:178574011;178574010;178574009 | chr2:179438738;179438737;179438736 |
Novex-2 | 15168 | 45727;45728;45729 | chr2:178574011;178574010;178574009 | chr2:179438738;179438737;179438736 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1245486609 | -1.74 | 0.497 | N | 0.52 | 0.451 | 0.803963018184 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/S | rs1245486609 | -1.74 | 0.497 | N | 0.52 | 0.451 | 0.803963018184 | gnomAD-4.0.0 | 1.59218E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3971 | ambiguous | 0.4177 | ambiguous | -2.364 | Highly Destabilizing | 0.072 | N | 0.406 | neutral | None | None | None | None | I |
L/C | 0.4419 | ambiguous | 0.4484 | ambiguous | -1.665 | Destabilizing | 0.968 | D | 0.483 | neutral | None | None | None | None | I |
L/D | 0.9287 | likely_pathogenic | 0.9403 | pathogenic | -2.323 | Highly Destabilizing | 0.726 | D | 0.595 | neutral | None | None | None | None | I |
L/E | 0.6595 | likely_pathogenic | 0.6909 | pathogenic | -2.141 | Highly Destabilizing | 0.726 | D | 0.589 | neutral | None | None | None | None | I |
L/F | 0.2336 | likely_benign | 0.2736 | benign | -1.398 | Destabilizing | 0.497 | N | 0.467 | neutral | N | 0.496965458 | None | None | I |
L/G | 0.7402 | likely_pathogenic | 0.7416 | pathogenic | -2.865 | Highly Destabilizing | 0.726 | D | 0.596 | neutral | None | None | None | None | I |
L/H | 0.4352 | ambiguous | 0.5014 | ambiguous | -2.219 | Highly Destabilizing | 0.968 | D | 0.615 | neutral | None | None | None | None | I |
L/I | 0.076 | likely_benign | 0.0814 | benign | -0.945 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.388872414 | None | None | I |
L/K | 0.4726 | ambiguous | 0.4843 | ambiguous | -1.837 | Destabilizing | 0.726 | D | 0.531 | neutral | None | None | None | None | I |
L/M | 0.1578 | likely_benign | 0.1611 | benign | -0.894 | Destabilizing | 0.567 | D | 0.499 | neutral | None | None | None | None | I |
L/N | 0.7309 | likely_pathogenic | 0.7317 | pathogenic | -2.041 | Highly Destabilizing | 0.89 | D | 0.605 | neutral | None | None | None | None | I |
L/P | 0.8955 | likely_pathogenic | 0.918 | pathogenic | -1.395 | Destabilizing | 0.89 | D | 0.595 | neutral | None | None | None | None | I |
L/Q | 0.3128 | likely_benign | 0.3437 | ambiguous | -1.968 | Destabilizing | 0.89 | D | 0.547 | neutral | None | None | None | None | I |
L/R | 0.3243 | likely_benign | 0.3587 | ambiguous | -1.464 | Destabilizing | 0.726 | D | 0.543 | neutral | None | None | None | None | I |
L/S | 0.546 | ambiguous | 0.596 | pathogenic | -2.757 | Highly Destabilizing | 0.497 | N | 0.52 | neutral | N | 0.506123659 | None | None | I |
L/T | 0.3283 | likely_benign | 0.324 | benign | -2.438 | Highly Destabilizing | 0.272 | N | 0.447 | neutral | None | None | None | None | I |
L/V | 0.0684 | likely_benign | 0.0747 | benign | -1.395 | Destabilizing | None | N | 0.169 | neutral | N | 0.326626302 | None | None | I |
L/W | 0.4629 | ambiguous | 0.5737 | pathogenic | -1.717 | Destabilizing | 0.968 | D | 0.601 | neutral | None | None | None | None | I |
L/Y | 0.5511 | ambiguous | 0.6127 | pathogenic | -1.433 | Destabilizing | 0.726 | D | 0.468 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.