Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24061 | 72406;72407;72408 | chr2:178573951;178573950;178573949 | chr2:179438678;179438677;179438676 |
N2AB | 22420 | 67483;67484;67485 | chr2:178573951;178573950;178573949 | chr2:179438678;179438677;179438676 |
N2A | 21493 | 64702;64703;64704 | chr2:178573951;178573950;178573949 | chr2:179438678;179438677;179438676 |
N2B | 14996 | 45211;45212;45213 | chr2:178573951;178573950;178573949 | chr2:179438678;179438677;179438676 |
Novex-1 | 15121 | 45586;45587;45588 | chr2:178573951;178573950;178573949 | chr2:179438678;179438677;179438676 |
Novex-2 | 15188 | 45787;45788;45789 | chr2:178573951;178573950;178573949 | chr2:179438678;179438677;179438676 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | None | None | 0.001 | N | 0.271 | 0.153 | 0.228597637076 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
M/T | rs200471370 | -1.528 | 0.425 | N | 0.567 | 0.397 | None | gnomAD-2.1.1 | 1.35953E-04 | None | None | None | None | N | None | 1.65549E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.58378E-04 | 1.40687E-04 |
M/T | rs200471370 | -1.528 | 0.425 | N | 0.567 | 0.397 | None | gnomAD-3.1.2 | 1.31631E-04 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.50103E-04 | 0 | 4.78469E-04 |
M/T | rs200471370 | -1.528 | 0.425 | N | 0.567 | 0.397 | None | gnomAD-4.0.0 | 2.91985E-04 | None | None | None | None | N | None | 6.68235E-05 | 1.66783E-05 | None | 0 | 0 | None | 0 | 0 | 3.39957E-04 | 0 | 1.02498E-03 |
M/V | rs201482015 | -1.315 | 0.065 | N | 0.343 | 0.148 | None | gnomAD-2.1.1 | 1.0732E-04 | None | None | None | None | N | None | 1.19973E-03 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.40687E-04 |
M/V | rs201482015 | -1.315 | 0.065 | N | 0.343 | 0.148 | None | gnomAD-3.1.2 | 3.87908E-04 | None | None | None | None | N | None | 1.39941E-03 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/V | rs201482015 | -1.315 | 0.065 | N | 0.343 | 0.148 | None | 1000 genomes | 3.99361E-04 | None | None | None | None | N | None | 1.5E-03 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
M/V | rs201482015 | -1.315 | 0.065 | N | 0.343 | 0.148 | None | gnomAD-4.0.0 | 7.87176E-05 | None | None | None | None | N | None | 1.4796E-03 | 5.001E-05 | None | 0 | 0 | None | 0 | 0 | 3.39108E-06 | 0 | 1.44083E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.5044 | ambiguous | 0.513 | ambiguous | -2.198 | Highly Destabilizing | 0.3 | N | 0.473 | neutral | None | None | None | None | N |
M/C | 0.7273 | likely_pathogenic | 0.7134 | pathogenic | -2.185 | Highly Destabilizing | 0.981 | D | 0.683 | prob.neutral | None | None | None | None | N |
M/D | 0.9821 | likely_pathogenic | 0.9789 | pathogenic | -1.604 | Destabilizing | 0.936 | D | 0.733 | prob.delet. | None | None | None | None | N |
M/E | 0.8554 | likely_pathogenic | 0.845 | pathogenic | -1.462 | Destabilizing | 0.936 | D | 0.687 | prob.neutral | None | None | None | None | N |
M/F | 0.4823 | ambiguous | 0.4802 | ambiguous | -0.892 | Destabilizing | 0.495 | N | 0.525 | neutral | None | None | None | None | N |
M/G | 0.8498 | likely_pathogenic | 0.8516 | pathogenic | -2.628 | Highly Destabilizing | 0.936 | D | 0.701 | prob.neutral | None | None | None | None | N |
M/H | 0.884 | likely_pathogenic | 0.8717 | pathogenic | -2.009 | Highly Destabilizing | 0.981 | D | 0.737 | prob.delet. | None | None | None | None | N |
M/I | 0.3624 | ambiguous | 0.3734 | ambiguous | -1.005 | Destabilizing | 0.001 | N | 0.271 | neutral | N | 0.298226193 | None | None | N |
M/K | 0.5302 | ambiguous | 0.5437 | ambiguous | -1.154 | Destabilizing | 0.6 | D | 0.601 | neutral | N | 0.438205156 | None | None | N |
M/L | 0.1518 | likely_benign | 0.1524 | benign | -1.005 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.38117565 | None | None | N |
M/N | 0.9046 | likely_pathogenic | 0.8937 | pathogenic | -1.274 | Destabilizing | 0.936 | D | 0.709 | prob.delet. | None | None | None | None | N |
M/P | 0.9255 | likely_pathogenic | 0.9163 | pathogenic | -1.38 | Destabilizing | 0.936 | D | 0.705 | prob.neutral | None | None | None | None | N |
M/Q | 0.6422 | likely_pathogenic | 0.6187 | pathogenic | -1.158 | Destabilizing | 0.936 | D | 0.561 | neutral | None | None | None | None | N |
M/R | 0.5597 | ambiguous | 0.5662 | pathogenic | -1.03 | Destabilizing | 0.784 | D | 0.617 | neutral | N | 0.511201405 | None | None | N |
M/S | 0.7167 | likely_pathogenic | 0.7231 | pathogenic | -1.917 | Destabilizing | 0.665 | D | 0.602 | neutral | None | None | None | None | N |
M/T | 0.3129 | likely_benign | 0.3281 | benign | -1.647 | Destabilizing | 0.425 | N | 0.567 | neutral | N | 0.423313061 | None | None | N |
M/V | 0.0814 | likely_benign | 0.0836 | benign | -1.38 | Destabilizing | 0.065 | N | 0.343 | neutral | N | 0.297409756 | None | None | N |
M/W | 0.8181 | likely_pathogenic | 0.8227 | pathogenic | -1.035 | Destabilizing | 0.995 | D | 0.685 | prob.neutral | None | None | None | None | N |
M/Y | 0.8043 | likely_pathogenic | 0.7921 | pathogenic | -1.027 | Destabilizing | 0.828 | D | 0.62 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.