Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24066 | 72421;72422;72423 | chr2:178573936;178573935;178573934 | chr2:179438663;179438662;179438661 |
N2AB | 22425 | 67498;67499;67500 | chr2:178573936;178573935;178573934 | chr2:179438663;179438662;179438661 |
N2A | 21498 | 64717;64718;64719 | chr2:178573936;178573935;178573934 | chr2:179438663;179438662;179438661 |
N2B | 15001 | 45226;45227;45228 | chr2:178573936;178573935;178573934 | chr2:179438663;179438662;179438661 |
Novex-1 | 15126 | 45601;45602;45603 | chr2:178573936;178573935;178573934 | chr2:179438663;179438662;179438661 |
Novex-2 | 15193 | 45802;45803;45804 | chr2:178573936;178573935;178573934 | chr2:179438663;179438662;179438661 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1357579405 | 0.335 | 0.007 | N | 0.215 | 0.124 | 0.222439326576 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
D/N | rs1357579405 | 0.335 | 0.007 | N | 0.215 | 0.124 | 0.222439326576 | gnomAD-4.0.0 | 2.73767E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1552 | likely_benign | 0.2085 | benign | -0.126 | Destabilizing | 0.309 | N | 0.393 | neutral | N | 0.469435638 | None | None | N |
D/C | 0.4925 | ambiguous | 0.572 | pathogenic | 0.21 | Stabilizing | 0.996 | D | 0.462 | neutral | None | None | None | None | N |
D/E | 0.1474 | likely_benign | 0.1749 | benign | -0.141 | Destabilizing | 0.003 | N | 0.161 | neutral | N | 0.465027865 | None | None | N |
D/F | 0.5245 | ambiguous | 0.6442 | pathogenic | -0.205 | Destabilizing | 0.835 | D | 0.461 | neutral | None | None | None | None | N |
D/G | 0.1038 | likely_benign | 0.1376 | benign | -0.272 | Destabilizing | 0.007 | N | 0.192 | neutral | N | 0.491323912 | None | None | N |
D/H | 0.3135 | likely_benign | 0.3881 | ambiguous | 0.036 | Stabilizing | 0.884 | D | 0.377 | neutral | D | 0.530674164 | None | None | N |
D/I | 0.4659 | ambiguous | 0.5836 | pathogenic | 0.197 | Stabilizing | 0.91 | D | 0.468 | neutral | None | None | None | None | N |
D/K | 0.4276 | ambiguous | 0.4957 | ambiguous | 0.597 | Stabilizing | 0.59 | D | 0.37 | neutral | None | None | None | None | N |
D/L | 0.3826 | ambiguous | 0.4903 | ambiguous | 0.197 | Stabilizing | 0.742 | D | 0.459 | neutral | None | None | None | None | N |
D/M | 0.5719 | likely_pathogenic | 0.6787 | pathogenic | 0.299 | Stabilizing | 0.996 | D | 0.443 | neutral | None | None | None | None | N |
D/N | 0.0882 | likely_benign | 0.1087 | benign | 0.344 | Stabilizing | 0.007 | N | 0.215 | neutral | N | 0.472119289 | None | None | N |
D/P | 0.8825 | likely_pathogenic | 0.9358 | pathogenic | 0.11 | Stabilizing | 0.953 | D | 0.365 | neutral | None | None | None | None | N |
D/Q | 0.3227 | likely_benign | 0.3831 | ambiguous | 0.359 | Stabilizing | 0.59 | D | 0.331 | neutral | None | None | None | None | N |
D/R | 0.4224 | ambiguous | 0.4948 | ambiguous | 0.655 | Stabilizing | 0.91 | D | 0.411 | neutral | None | None | None | None | N |
D/S | 0.1343 | likely_benign | 0.1712 | benign | 0.26 | Stabilizing | 0.59 | D | 0.272 | neutral | None | None | None | None | N |
D/T | 0.3303 | likely_benign | 0.4279 | ambiguous | 0.378 | Stabilizing | 0.742 | D | 0.379 | neutral | None | None | None | None | N |
D/V | 0.2754 | likely_benign | 0.3805 | ambiguous | 0.11 | Stabilizing | 0.684 | D | 0.472 | neutral | N | 0.487477441 | None | None | N |
D/W | 0.8131 | likely_pathogenic | 0.8654 | pathogenic | -0.131 | Destabilizing | 0.987 | D | 0.463 | neutral | None | None | None | None | N |
D/Y | 0.1903 | likely_benign | 0.2429 | benign | 0.026 | Stabilizing | 0.015 | N | 0.369 | neutral | N | 0.519406764 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.