Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24077 | 72454;72455;72456 | chr2:178573903;178573902;178573901 | chr2:179438630;179438629;179438628 |
N2AB | 22436 | 67531;67532;67533 | chr2:178573903;178573902;178573901 | chr2:179438630;179438629;179438628 |
N2A | 21509 | 64750;64751;64752 | chr2:178573903;178573902;178573901 | chr2:179438630;179438629;179438628 |
N2B | 15012 | 45259;45260;45261 | chr2:178573903;178573902;178573901 | chr2:179438630;179438629;179438628 |
Novex-1 | 15137 | 45634;45635;45636 | chr2:178573903;178573902;178573901 | chr2:179438630;179438629;179438628 |
Novex-2 | 15204 | 45835;45836;45837 | chr2:178573903;178573902;178573901 | chr2:179438630;179438629;179438628 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.555 | 0.3 | 0.357724736475 | gnomAD-4.0.0 | 6.85309E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00782E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2562 | likely_benign | 0.258 | benign | -0.919 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.493201201 | None | None | N |
E/C | 0.8973 | likely_pathogenic | 0.8879 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/D | 0.1732 | likely_benign | 0.1565 | benign | -1.064 | Destabilizing | 0.999 | D | 0.429 | neutral | D | 0.534520982 | None | None | N |
E/F | 0.8298 | likely_pathogenic | 0.8275 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/G | 0.3222 | likely_benign | 0.3235 | benign | -1.267 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.49159504 | None | None | N |
E/H | 0.5693 | likely_pathogenic | 0.538 | ambiguous | -0.831 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
E/I | 0.4346 | ambiguous | 0.4389 | ambiguous | 0.023 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/K | 0.3491 | ambiguous | 0.3489 | ambiguous | -0.502 | Destabilizing | 0.999 | D | 0.565 | neutral | N | 0.505600797 | None | None | N |
E/L | 0.5142 | ambiguous | 0.5292 | ambiguous | 0.023 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/M | 0.548 | ambiguous | 0.5697 | pathogenic | 0.506 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/N | 0.3687 | ambiguous | 0.3679 | ambiguous | -0.952 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/P | 0.9683 | likely_pathogenic | 0.9599 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/Q | 0.1782 | likely_benign | 0.1798 | benign | -0.836 | Destabilizing | 1.0 | D | 0.555 | neutral | N | 0.491460851 | None | None | N |
E/R | 0.4823 | ambiguous | 0.4546 | ambiguous | -0.327 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/S | 0.2982 | likely_benign | 0.2954 | benign | -1.259 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
E/T | 0.2929 | likely_benign | 0.2866 | benign | -0.965 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/V | 0.2678 | likely_benign | 0.2774 | benign | -0.27 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.529403163 | None | None | N |
E/W | 0.9352 | likely_pathogenic | 0.9268 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/Y | 0.7546 | likely_pathogenic | 0.7284 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.