Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24084 | 72475;72476;72477 | chr2:178573882;178573881;178573880 | chr2:179438609;179438608;179438607 |
N2AB | 22443 | 67552;67553;67554 | chr2:178573882;178573881;178573880 | chr2:179438609;179438608;179438607 |
N2A | 21516 | 64771;64772;64773 | chr2:178573882;178573881;178573880 | chr2:179438609;179438608;179438607 |
N2B | 15019 | 45280;45281;45282 | chr2:178573882;178573881;178573880 | chr2:179438609;179438608;179438607 |
Novex-1 | 15144 | 45655;45656;45657 | chr2:178573882;178573881;178573880 | chr2:179438609;179438608;179438607 |
Novex-2 | 15211 | 45856;45857;45858 | chr2:178573882;178573881;178573880 | chr2:179438609;179438608;179438607 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.996 | D | 0.563 | 0.378 | 0.479133204078 | gnomAD-4.0.0 | 2.74154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60385E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0824 | likely_benign | 0.091 | benign | -0.46 | Destabilizing | 0.906 | D | 0.463 | neutral | N | 0.491884925 | None | None | N |
S/C | 0.0968 | likely_benign | 0.0983 | benign | -0.331 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.496874959 | None | None | N |
S/D | 0.5226 | ambiguous | 0.5106 | ambiguous | -0.745 | Destabilizing | 0.969 | D | 0.483 | neutral | None | None | None | None | N |
S/E | 0.5318 | ambiguous | 0.4955 | ambiguous | -0.776 | Destabilizing | 0.939 | D | 0.469 | neutral | None | None | None | None | N |
S/F | 0.1484 | likely_benign | 0.1663 | benign | -0.761 | Destabilizing | 0.852 | D | 0.569 | neutral | D | 0.525325495 | None | None | N |
S/G | 0.1355 | likely_benign | 0.1334 | benign | -0.683 | Destabilizing | 0.927 | D | 0.448 | neutral | None | None | None | None | N |
S/H | 0.2588 | likely_benign | 0.2225 | benign | -1.331 | Destabilizing | 0.02 | N | 0.258 | neutral | None | None | None | None | N |
S/I | 0.1656 | likely_benign | 0.1717 | benign | 0.018 | Stabilizing | 0.991 | D | 0.571 | neutral | None | None | None | None | N |
S/K | 0.5588 | ambiguous | 0.5164 | ambiguous | -0.833 | Destabilizing | 0.969 | D | 0.483 | neutral | None | None | None | None | N |
S/L | 0.0977 | likely_benign | 0.1115 | benign | 0.018 | Stabilizing | 0.939 | D | 0.552 | neutral | None | None | None | None | N |
S/M | 0.2017 | likely_benign | 0.2126 | benign | 0.415 | Stabilizing | 0.997 | D | 0.525 | neutral | None | None | None | None | N |
S/N | 0.1828 | likely_benign | 0.1718 | benign | -0.75 | Destabilizing | 0.939 | D | 0.491 | neutral | None | None | None | None | N |
S/P | 0.842 | likely_pathogenic | 0.8452 | pathogenic | -0.108 | Destabilizing | 0.996 | D | 0.563 | neutral | D | 0.531078032 | None | None | N |
S/Q | 0.4136 | ambiguous | 0.3712 | ambiguous | -0.97 | Destabilizing | 0.991 | D | 0.529 | neutral | None | None | None | None | N |
S/R | 0.4485 | ambiguous | 0.4009 | ambiguous | -0.659 | Destabilizing | 0.982 | D | 0.554 | neutral | None | None | None | None | N |
S/T | 0.0763 | likely_benign | 0.0795 | benign | -0.676 | Destabilizing | 0.959 | D | 0.48 | neutral | N | 0.431663186 | None | None | N |
S/V | 0.1717 | likely_benign | 0.1815 | benign | -0.108 | Destabilizing | 0.939 | D | 0.57 | neutral | None | None | None | None | N |
S/W | 0.3068 | likely_benign | 0.3181 | benign | -0.806 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
S/Y | 0.1595 | likely_benign | 0.1649 | benign | -0.527 | Destabilizing | 0.134 | N | 0.365 | neutral | N | 0.485113669 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.