Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24089 | 72490;72491;72492 | chr2:178573867;178573866;178573865 | chr2:179438594;179438593;179438592 |
N2AB | 22448 | 67567;67568;67569 | chr2:178573867;178573866;178573865 | chr2:179438594;179438593;179438592 |
N2A | 21521 | 64786;64787;64788 | chr2:178573867;178573866;178573865 | chr2:179438594;179438593;179438592 |
N2B | 15024 | 45295;45296;45297 | chr2:178573867;178573866;178573865 | chr2:179438594;179438593;179438592 |
Novex-1 | 15149 | 45670;45671;45672 | chr2:178573867;178573866;178573865 | chr2:179438594;179438593;179438592 |
Novex-2 | 15216 | 45871;45872;45873 | chr2:178573867;178573866;178573865 | chr2:179438594;179438593;179438592 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.684 | N | 0.668 | 0.201 | 0.212008924253 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
N/Y | rs1709123437 | None | 0.979 | N | 0.85 | 0.367 | 0.546607571196 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/Y | rs1709123437 | None | 0.979 | N | 0.85 | 0.367 | 0.546607571196 | gnomAD-4.0.0 | 2.57093E-06 | None | None | None | None | N | None | 3.38822E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3915 | ambiguous | 0.3642 | ambiguous | -1.098 | Destabilizing | 0.373 | N | 0.74 | deleterious | None | None | None | None | N |
N/C | 0.1706 | likely_benign | 0.1586 | benign | -0.446 | Destabilizing | 0.02 | N | 0.693 | prob.neutral | None | None | None | None | N |
N/D | 0.5465 | ambiguous | 0.5651 | pathogenic | -1.733 | Destabilizing | 0.684 | D | 0.634 | neutral | N | 0.511297405 | None | None | N |
N/E | 0.7995 | likely_pathogenic | 0.8097 | pathogenic | -1.48 | Destabilizing | 0.742 | D | 0.667 | neutral | None | None | None | None | N |
N/F | 0.6933 | likely_pathogenic | 0.7177 | pathogenic | -0.554 | Destabilizing | 0.953 | D | 0.867 | deleterious | None | None | None | None | N |
N/G | 0.6031 | likely_pathogenic | 0.5976 | pathogenic | -1.533 | Destabilizing | 0.742 | D | 0.645 | neutral | None | None | None | None | N |
N/H | 0.1623 | likely_benign | 0.1784 | benign | -0.987 | Destabilizing | 0.979 | D | 0.683 | prob.neutral | N | 0.511124047 | None | None | N |
N/I | 0.1498 | likely_benign | 0.1441 | benign | 0.073 | Stabilizing | 0.521 | D | 0.821 | deleterious | N | 0.279069137 | None | None | N |
N/K | 0.6802 | likely_pathogenic | 0.7256 | pathogenic | -0.245 | Destabilizing | 0.684 | D | 0.668 | neutral | N | 0.473683167 | None | None | N |
N/L | 0.2718 | likely_benign | 0.2784 | benign | 0.073 | Stabilizing | 0.59 | D | 0.787 | deleterious | None | None | None | None | N |
N/M | 0.3779 | ambiguous | 0.3863 | ambiguous | 0.336 | Stabilizing | 0.987 | D | 0.861 | deleterious | None | None | None | None | N |
N/P | 0.9255 | likely_pathogenic | 0.927 | pathogenic | -0.289 | Destabilizing | 0.953 | D | 0.85 | deleterious | None | None | None | None | N |
N/Q | 0.5686 | likely_pathogenic | 0.5954 | pathogenic | -0.956 | Destabilizing | 0.953 | D | 0.707 | prob.neutral | None | None | None | None | N |
N/R | 0.6916 | likely_pathogenic | 0.7231 | pathogenic | -0.468 | Destabilizing | 0.953 | D | 0.701 | prob.neutral | None | None | None | None | N |
N/S | 0.111 | likely_benign | 0.1137 | benign | -1.367 | Destabilizing | 0.078 | N | 0.383 | neutral | N | 0.481494573 | None | None | N |
N/T | 0.2067 | likely_benign | 0.2153 | benign | -0.905 | Destabilizing | 0.521 | D | 0.649 | neutral | N | 0.481147857 | None | None | N |
N/V | 0.1557 | likely_benign | 0.1472 | benign | -0.289 | Destabilizing | 0.02 | N | 0.629 | neutral | None | None | None | None | N |
N/W | 0.8625 | likely_pathogenic | 0.8799 | pathogenic | -0.414 | Destabilizing | 0.996 | D | 0.853 | deleterious | None | None | None | None | N |
N/Y | 0.2429 | likely_benign | 0.2519 | benign | -0.08 | Destabilizing | 0.979 | D | 0.85 | deleterious | N | 0.481494573 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.