Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24090 | 72493;72494;72495 | chr2:178573864;178573863;178573862 | chr2:179438591;179438590;179438589 |
N2AB | 22449 | 67570;67571;67572 | chr2:178573864;178573863;178573862 | chr2:179438591;179438590;179438589 |
N2A | 21522 | 64789;64790;64791 | chr2:178573864;178573863;178573862 | chr2:179438591;179438590;179438589 |
N2B | 15025 | 45298;45299;45300 | chr2:178573864;178573863;178573862 | chr2:179438591;179438590;179438589 |
Novex-1 | 15150 | 45673;45674;45675 | chr2:178573864;178573863;178573862 | chr2:179438591;179438590;179438589 |
Novex-2 | 15217 | 45874;45875;45876 | chr2:178573864;178573863;178573862 | chr2:179438591;179438590;179438589 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1709122606 | None | 0.999 | N | 0.57 | 0.437 | 0.426904299391 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6666 | likely_pathogenic | 0.6901 | pathogenic | -0.342 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
K/C | 0.8895 | likely_pathogenic | 0.8946 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
K/D | 0.8879 | likely_pathogenic | 0.8954 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/E | 0.4671 | ambiguous | 0.4975 | ambiguous | -0.299 | Destabilizing | 0.999 | D | 0.57 | neutral | N | 0.514164352 | None | None | N |
K/F | 0.9219 | likely_pathogenic | 0.9232 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/G | 0.75 | likely_pathogenic | 0.7675 | pathogenic | -0.659 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/H | 0.5357 | ambiguous | 0.5397 | ambiguous | -1.124 | Destabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | N |
K/I | 0.5885 | likely_pathogenic | 0.593 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.48922841 | None | None | N |
K/L | 0.6133 | likely_pathogenic | 0.6343 | pathogenic | 0.454 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/M | 0.4638 | ambiguous | 0.4755 | ambiguous | 0.522 | Stabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
K/N | 0.7901 | likely_pathogenic | 0.8095 | pathogenic | -0.269 | Destabilizing | 1.0 | D | 0.666 | neutral | N | 0.516916656 | None | None | N |
K/P | 0.8854 | likely_pathogenic | 0.8936 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/Q | 0.2858 | likely_benign | 0.3018 | benign | -0.476 | Destabilizing | 1.0 | D | 0.65 | neutral | D | 0.531960679 | None | None | N |
K/R | 0.0883 | likely_benign | 0.0926 | benign | -0.459 | Destabilizing | 0.999 | D | 0.502 | neutral | N | 0.453366609 | None | None | N |
K/S | 0.7668 | likely_pathogenic | 0.7872 | pathogenic | -0.835 | Destabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
K/T | 0.3732 | ambiguous | 0.3893 | ambiguous | -0.598 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.511625479 | None | None | N |
K/V | 0.5736 | likely_pathogenic | 0.5825 | pathogenic | 0.219 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/W | 0.8737 | likely_pathogenic | 0.8785 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
K/Y | 0.8289 | likely_pathogenic | 0.8274 | pathogenic | 0.121 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.