Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24097 | 72514;72515;72516 | chr2:178573843;178573842;178573841 | chr2:179438570;179438569;179438568 |
N2AB | 22456 | 67591;67592;67593 | chr2:178573843;178573842;178573841 | chr2:179438570;179438569;179438568 |
N2A | 21529 | 64810;64811;64812 | chr2:178573843;178573842;178573841 | chr2:179438570;179438569;179438568 |
N2B | 15032 | 45319;45320;45321 | chr2:178573843;178573842;178573841 | chr2:179438570;179438569;179438568 |
Novex-1 | 15157 | 45694;45695;45696 | chr2:178573843;178573842;178573841 | chr2:179438570;179438569;179438568 |
Novex-2 | 15224 | 45895;45896;45897 | chr2:178573843;178573842;178573841 | chr2:179438570;179438569;179438568 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.117 | N | 0.532 | 0.287 | 0.251639045875 | gnomAD-4.0.0 | 2.05543E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73732E-04 | 9.00575E-07 | 0 | 1.65898E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1206 | likely_benign | 0.1298 | benign | -0.826 | Destabilizing | 0.016 | N | 0.317 | neutral | None | None | None | None | N |
S/C | 0.1405 | likely_benign | 0.1642 | benign | -0.617 | Destabilizing | 0.915 | D | 0.523 | neutral | D | 0.531744024 | None | None | N |
S/D | 0.7477 | likely_pathogenic | 0.8265 | pathogenic | -0.224 | Destabilizing | 0.149 | N | 0.517 | neutral | None | None | None | None | N |
S/E | 0.8042 | likely_pathogenic | 0.8472 | pathogenic | -0.223 | Destabilizing | 0.262 | N | 0.489 | neutral | None | None | None | None | N |
S/F | 0.717 | likely_pathogenic | 0.7652 | pathogenic | -1.066 | Destabilizing | 0.791 | D | 0.56 | neutral | None | None | None | None | N |
S/G | 0.0489 | likely_benign | 0.0601 | benign | -1.065 | Destabilizing | None | N | 0.142 | neutral | N | 0.496928173 | None | None | N |
S/H | 0.6566 | likely_pathogenic | 0.703 | pathogenic | -1.51 | Destabilizing | 0.791 | D | 0.545 | neutral | None | None | None | None | N |
S/I | 0.5548 | ambiguous | 0.6426 | pathogenic | -0.293 | Destabilizing | 0.484 | N | 0.575 | neutral | N | 0.517411977 | None | None | N |
S/K | 0.841 | likely_pathogenic | 0.8835 | pathogenic | -0.643 | Destabilizing | 0.149 | N | 0.489 | neutral | None | None | None | None | N |
S/L | 0.3552 | ambiguous | 0.406 | ambiguous | -0.293 | Destabilizing | 0.149 | N | 0.559 | neutral | None | None | None | None | N |
S/M | 0.4311 | ambiguous | 0.4877 | ambiguous | 0.005 | Stabilizing | 0.935 | D | 0.536 | neutral | None | None | None | None | N |
S/N | 0.3509 | ambiguous | 0.4045 | ambiguous | -0.654 | Destabilizing | 0.117 | N | 0.532 | neutral | N | 0.500762526 | None | None | N |
S/P | 0.948 | likely_pathogenic | 0.9512 | pathogenic | -0.438 | Destabilizing | 0.555 | D | 0.561 | neutral | None | None | None | None | N |
S/Q | 0.7048 | likely_pathogenic | 0.7516 | pathogenic | -0.82 | Destabilizing | 0.555 | D | 0.545 | neutral | None | None | None | None | N |
S/R | 0.7288 | likely_pathogenic | 0.7991 | pathogenic | -0.538 | Destabilizing | 0.484 | N | 0.562 | neutral | N | 0.497470843 | None | None | N |
S/T | 0.1039 | likely_benign | 0.1263 | benign | -0.701 | Destabilizing | 0.117 | N | 0.527 | neutral | N | 0.51687937 | None | None | N |
S/V | 0.5256 | ambiguous | 0.6227 | pathogenic | -0.438 | Destabilizing | 0.262 | N | 0.548 | neutral | None | None | None | None | N |
S/W | 0.7759 | likely_pathogenic | 0.8202 | pathogenic | -1.007 | Destabilizing | 0.935 | D | 0.573 | neutral | None | None | None | None | N |
S/Y | 0.6002 | likely_pathogenic | 0.6574 | pathogenic | -0.74 | Destabilizing | 0.791 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.