Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24134 | 72625;72626;72627 | chr2:178573732;178573731;178573730 | chr2:179438459;179438458;179438457 |
N2AB | 22493 | 67702;67703;67704 | chr2:178573732;178573731;178573730 | chr2:179438459;179438458;179438457 |
N2A | 21566 | 64921;64922;64923 | chr2:178573732;178573731;178573730 | chr2:179438459;179438458;179438457 |
N2B | 15069 | 45430;45431;45432 | chr2:178573732;178573731;178573730 | chr2:179438459;179438458;179438457 |
Novex-1 | 15194 | 45805;45806;45807 | chr2:178573732;178573731;178573730 | chr2:179438459;179438458;179438457 |
Novex-2 | 15261 | 46006;46007;46008 | chr2:178573732;178573731;178573730 | chr2:179438459;179438458;179438457 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.027 | N | 0.369 | 0.219 | 0.266385636622 | gnomAD-4.0.0 | 1.7459E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.68481E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1567 | likely_benign | 0.1512 | benign | -0.472 | Destabilizing | 0.027 | N | 0.369 | neutral | N | 0.460588078 | None | None | N |
E/C | 0.8087 | likely_pathogenic | 0.8226 | pathogenic | -0.197 | Destabilizing | 0.935 | D | 0.465 | neutral | None | None | None | None | N |
E/D | 0.0655 | likely_benign | 0.0697 | benign | -0.53 | Destabilizing | None | N | 0.056 | neutral | N | 0.370371506 | None | None | N |
E/F | 0.8149 | likely_pathogenic | 0.8257 | pathogenic | -0.187 | Destabilizing | 0.791 | D | 0.496 | neutral | None | None | None | None | N |
E/G | 0.1329 | likely_benign | 0.1301 | benign | -0.724 | Destabilizing | None | N | 0.15 | neutral | N | 0.407236383 | None | None | N |
E/H | 0.4931 | ambiguous | 0.4894 | ambiguous | -0.1 | Destabilizing | 0.555 | D | 0.383 | neutral | None | None | None | None | N |
E/I | 0.5789 | likely_pathogenic | 0.5922 | pathogenic | 0.175 | Stabilizing | 0.555 | D | 0.511 | neutral | None | None | None | None | N |
E/K | 0.2773 | likely_benign | 0.2752 | benign | 0.045 | Stabilizing | 0.117 | N | 0.285 | neutral | N | 0.463148381 | None | None | N |
E/L | 0.5147 | ambiguous | 0.521 | ambiguous | 0.175 | Stabilizing | 0.149 | N | 0.495 | neutral | None | None | None | None | N |
E/M | 0.5733 | likely_pathogenic | 0.5882 | pathogenic | 0.285 | Stabilizing | 0.935 | D | 0.435 | neutral | None | None | None | None | N |
E/N | 0.1821 | likely_benign | 0.1873 | benign | -0.333 | Destabilizing | 0.081 | N | 0.261 | neutral | None | None | None | None | N |
E/P | 0.8075 | likely_pathogenic | 0.7959 | pathogenic | -0.02 | Destabilizing | 0.262 | N | 0.419 | neutral | None | None | None | None | N |
E/Q | 0.2028 | likely_benign | 0.1959 | benign | -0.267 | Destabilizing | 0.117 | N | 0.337 | neutral | N | 0.484697089 | None | None | N |
E/R | 0.3876 | ambiguous | 0.3821 | ambiguous | 0.31 | Stabilizing | 0.38 | N | 0.365 | neutral | None | None | None | None | N |
E/S | 0.1642 | likely_benign | 0.1618 | benign | -0.519 | Destabilizing | 0.035 | N | 0.272 | neutral | None | None | None | None | N |
E/T | 0.2631 | likely_benign | 0.2641 | benign | -0.317 | Destabilizing | 0.149 | N | 0.382 | neutral | None | None | None | None | N |
E/V | 0.3596 | ambiguous | 0.3719 | ambiguous | -0.02 | Destabilizing | 0.211 | N | 0.455 | neutral | N | 0.474730812 | None | None | N |
E/W | 0.9125 | likely_pathogenic | 0.9182 | pathogenic | 0.002 | Stabilizing | 0.935 | D | 0.502 | neutral | None | None | None | None | N |
E/Y | 0.6313 | likely_pathogenic | 0.651 | pathogenic | 0.056 | Stabilizing | 0.791 | D | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.