Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2414 | 7465;7466;7467 | chr2:178773928;178773927;178773926 | chr2:179638655;179638654;179638653 |
N2AB | 2414 | 7465;7466;7467 | chr2:178773928;178773927;178773926 | chr2:179638655;179638654;179638653 |
N2A | 2414 | 7465;7466;7467 | chr2:178773928;178773927;178773926 | chr2:179638655;179638654;179638653 |
N2B | 2368 | 7327;7328;7329 | chr2:178773928;178773927;178773926 | chr2:179638655;179638654;179638653 |
Novex-1 | 2368 | 7327;7328;7329 | chr2:178773928;178773927;178773926 | chr2:179638655;179638654;179638653 |
Novex-2 | 2368 | 7327;7328;7329 | chr2:178773928;178773927;178773926 | chr2:179638655;179638654;179638653 |
Novex-3 | 2414 | 7465;7466;7467 | chr2:178773928;178773927;178773926 | chr2:179638655;179638654;179638653 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs754815454 | -1.128 | 0.001 | D | 0.298 | 0.327 | 0.422160833541 | gnomAD-2.1.1 | 7.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
I/L | rs754815454 | -1.128 | 0.001 | D | 0.298 | 0.327 | 0.422160833541 | gnomAD-4.0.0 | 1.36816E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79861E-06 | 0 | 0 |
I/V | None | None | 0.002 | D | 0.283 | 0.262 | 0.555277862696 | gnomAD-4.0.0 | 4.10447E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39584E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7678 | likely_pathogenic | 0.7478 | pathogenic | -2.894 | Highly Destabilizing | 0.25 | N | 0.676 | prob.neutral | None | None | None | None | N |
I/C | 0.9383 | likely_pathogenic | 0.9322 | pathogenic | -2.248 | Highly Destabilizing | 0.992 | D | 0.747 | deleterious | None | None | None | None | N |
I/D | 0.9969 | likely_pathogenic | 0.9967 | pathogenic | -3.627 | Highly Destabilizing | 0.972 | D | 0.811 | deleterious | None | None | None | None | N |
I/E | 0.9863 | likely_pathogenic | 0.9857 | pathogenic | -3.416 | Highly Destabilizing | 0.92 | D | 0.801 | deleterious | None | None | None | None | N |
I/F | 0.5065 | ambiguous | 0.4859 | ambiguous | -1.677 | Destabilizing | 0.81 | D | 0.729 | prob.delet. | D | 0.655267441 | None | None | N |
I/G | 0.9828 | likely_pathogenic | 0.981 | pathogenic | -3.394 | Highly Destabilizing | 0.92 | D | 0.791 | deleterious | None | None | None | None | N |
I/H | 0.9752 | likely_pathogenic | 0.9735 | pathogenic | -2.916 | Highly Destabilizing | 0.992 | D | 0.797 | deleterious | None | None | None | None | N |
I/K | 0.9666 | likely_pathogenic | 0.9633 | pathogenic | -2.478 | Highly Destabilizing | 0.92 | D | 0.793 | deleterious | None | None | None | None | N |
I/L | 0.1974 | likely_benign | 0.1932 | benign | -1.425 | Destabilizing | 0.001 | N | 0.298 | neutral | D | 0.547150037 | None | None | N |
I/M | 0.1964 | likely_benign | 0.1906 | benign | -1.377 | Destabilizing | 0.81 | D | 0.695 | prob.neutral | D | 0.693877966 | None | None | N |
I/N | 0.9619 | likely_pathogenic | 0.961 | pathogenic | -2.826 | Highly Destabilizing | 0.963 | D | 0.812 | deleterious | D | 0.72894482 | None | None | N |
I/P | 0.9957 | likely_pathogenic | 0.9954 | pathogenic | -1.901 | Destabilizing | 0.972 | D | 0.812 | deleterious | None | None | None | None | N |
I/Q | 0.9641 | likely_pathogenic | 0.9619 | pathogenic | -2.688 | Highly Destabilizing | 0.972 | D | 0.808 | deleterious | None | None | None | None | N |
I/R | 0.9452 | likely_pathogenic | 0.9395 | pathogenic | -2.074 | Highly Destabilizing | 0.92 | D | 0.812 | deleterious | None | None | None | None | N |
I/S | 0.9033 | likely_pathogenic | 0.8993 | pathogenic | -3.396 | Highly Destabilizing | 0.81 | D | 0.781 | deleterious | D | 0.72894482 | None | None | N |
I/T | 0.6554 | likely_pathogenic | 0.6401 | pathogenic | -3.068 | Highly Destabilizing | 0.549 | D | 0.695 | prob.neutral | D | 0.72912795 | None | None | N |
I/V | 0.1081 | likely_benign | 0.1066 | benign | -1.901 | Destabilizing | 0.002 | N | 0.283 | neutral | D | 0.579449295 | None | None | N |
I/W | 0.9714 | likely_pathogenic | 0.9691 | pathogenic | -2.197 | Highly Destabilizing | 0.992 | D | 0.791 | deleterious | None | None | None | None | N |
I/Y | 0.9363 | likely_pathogenic | 0.933 | pathogenic | -2.01 | Highly Destabilizing | 0.92 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.