Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24149 | 72670;72671;72672 | chr2:178573687;178573686;178573685 | chr2:179438414;179438413;179438412 |
N2AB | 22508 | 67747;67748;67749 | chr2:178573687;178573686;178573685 | chr2:179438414;179438413;179438412 |
N2A | 21581 | 64966;64967;64968 | chr2:178573687;178573686;178573685 | chr2:179438414;179438413;179438412 |
N2B | 15084 | 45475;45476;45477 | chr2:178573687;178573686;178573685 | chr2:179438414;179438413;179438412 |
Novex-1 | 15209 | 45850;45851;45852 | chr2:178573687;178573686;178573685 | chr2:179438414;179438413;179438412 |
Novex-2 | 15276 | 46051;46052;46053 | chr2:178573687;178573686;178573685 | chr2:179438414;179438413;179438412 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 0.005 | N | 0.161 | 0.127 | 0.225902525712 | gnomAD-4.0.0 | 1.8644E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.69833E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3679 | ambiguous | 0.4295 | ambiguous | -0.424 | Destabilizing | 0.669 | D | 0.467 | neutral | N | 0.469354095 | None | None | I |
D/C | 0.7641 | likely_pathogenic | 0.8046 | pathogenic | 0.033 | Stabilizing | 0.998 | D | 0.5 | neutral | None | None | None | None | I |
D/E | 0.2299 | likely_benign | 0.3044 | benign | -0.398 | Destabilizing | 0.625 | D | 0.422 | neutral | N | 0.449696294 | None | None | I |
D/F | 0.7196 | likely_pathogenic | 0.7619 | pathogenic | -0.374 | Destabilizing | 0.974 | D | 0.493 | neutral | None | None | None | None | I |
D/G | 0.4648 | ambiguous | 0.5226 | ambiguous | -0.643 | Destabilizing | 0.801 | D | 0.449 | neutral | N | 0.473811093 | None | None | I |
D/H | 0.3618 | ambiguous | 0.4482 | ambiguous | -0.412 | Destabilizing | 0.005 | N | 0.161 | neutral | N | 0.473554589 | None | None | I |
D/I | 0.6362 | likely_pathogenic | 0.6863 | pathogenic | 0.109 | Stabilizing | 0.974 | D | 0.501 | neutral | None | None | None | None | I |
D/K | 0.7182 | likely_pathogenic | 0.7862 | pathogenic | 0.16 | Stabilizing | 0.842 | D | 0.481 | neutral | None | None | None | None | I |
D/L | 0.555 | ambiguous | 0.6277 | pathogenic | 0.109 | Stabilizing | 0.949 | D | 0.478 | neutral | None | None | None | None | I |
D/M | 0.7702 | likely_pathogenic | 0.8123 | pathogenic | 0.395 | Stabilizing | 0.998 | D | 0.465 | neutral | None | None | None | None | I |
D/N | 0.1839 | likely_benign | 0.193 | benign | -0.15 | Destabilizing | 0.801 | D | 0.457 | neutral | N | 0.481403281 | None | None | I |
D/P | 0.9625 | likely_pathogenic | 0.9705 | pathogenic | -0.046 | Destabilizing | 0.974 | D | 0.425 | neutral | None | None | None | None | I |
D/Q | 0.4763 | ambiguous | 0.5708 | pathogenic | -0.099 | Destabilizing | 0.949 | D | 0.369 | neutral | None | None | None | None | I |
D/R | 0.6989 | likely_pathogenic | 0.7654 | pathogenic | 0.253 | Stabilizing | 0.949 | D | 0.465 | neutral | None | None | None | None | I |
D/S | 0.2681 | likely_benign | 0.2994 | benign | -0.256 | Destabilizing | 0.172 | N | 0.197 | neutral | None | None | None | None | I |
D/T | 0.5118 | ambiguous | 0.5694 | pathogenic | -0.084 | Destabilizing | 0.728 | D | 0.483 | neutral | None | None | None | None | I |
D/V | 0.4247 | ambiguous | 0.4749 | ambiguous | -0.046 | Destabilizing | 0.966 | D | 0.477 | neutral | N | 0.4807104 | None | None | I |
D/W | 0.9284 | likely_pathogenic | 0.943 | pathogenic | -0.236 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | I |
D/Y | 0.3686 | ambiguous | 0.4338 | ambiguous | -0.146 | Destabilizing | 0.934 | D | 0.491 | neutral | N | 0.495642014 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.