Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24156 | 72691;72692;72693 | chr2:178573666;178573665;178573664 | chr2:179438393;179438392;179438391 |
N2AB | 22515 | 67768;67769;67770 | chr2:178573666;178573665;178573664 | chr2:179438393;179438392;179438391 |
N2A | 21588 | 64987;64988;64989 | chr2:178573666;178573665;178573664 | chr2:179438393;179438392;179438391 |
N2B | 15091 | 45496;45497;45498 | chr2:178573666;178573665;178573664 | chr2:179438393;179438392;179438391 |
Novex-1 | 15216 | 45871;45872;45873 | chr2:178573666;178573665;178573664 | chr2:179438393;179438392;179438391 |
Novex-2 | 15283 | 46072;46073;46074 | chr2:178573666;178573665;178573664 | chr2:179438393;179438392;179438391 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1709040632 | None | 0.22 | N | 0.496 | 0.149 | 0.159798565429 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs1709040632 | None | 0.22 | N | 0.496 | 0.149 | 0.159798565429 | gnomAD-4.0.0 | 6.57592E-06 | None | None | None | None | I | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1256 | likely_benign | 0.1559 | benign | -0.494 | Destabilizing | 0.124 | N | 0.517 | neutral | N | 0.450411157 | None | None | I |
D/C | 0.4423 | ambiguous | 0.5564 | ambiguous | -0.26 | Destabilizing | 0.968 | D | 0.71 | prob.delet. | None | None | None | None | I |
D/E | 0.1053 | likely_benign | 0.1283 | benign | -0.51 | Destabilizing | None | N | 0.091 | neutral | N | 0.397808823 | None | None | I |
D/F | 0.4633 | ambiguous | 0.5422 | ambiguous | -0.311 | Destabilizing | 0.89 | D | 0.657 | neutral | None | None | None | None | I |
D/G | 0.1515 | likely_benign | 0.1853 | benign | -0.755 | Destabilizing | 0.124 | N | 0.469 | neutral | N | 0.457011842 | None | None | I |
D/H | 0.2027 | likely_benign | 0.2554 | benign | -0.437 | Destabilizing | 0.667 | D | 0.587 | neutral | N | 0.488796187 | None | None | I |
D/I | 0.2285 | likely_benign | 0.2847 | benign | 0.166 | Stabilizing | 0.726 | D | 0.651 | neutral | None | None | None | None | I |
D/K | 0.3023 | likely_benign | 0.3714 | ambiguous | -0.43 | Destabilizing | 0.157 | N | 0.461 | neutral | None | None | None | None | I |
D/L | 0.2415 | likely_benign | 0.3096 | benign | 0.166 | Stabilizing | 0.567 | D | 0.547 | neutral | None | None | None | None | I |
D/M | 0.4131 | ambiguous | 0.4981 | ambiguous | 0.394 | Stabilizing | 0.968 | D | 0.655 | neutral | None | None | None | None | I |
D/N | 0.0898 | likely_benign | 0.1033 | benign | -0.6 | Destabilizing | 0.22 | N | 0.496 | neutral | N | 0.46089751 | None | None | I |
D/P | 0.8317 | likely_pathogenic | 0.8537 | pathogenic | -0.031 | Destabilizing | 0.726 | D | 0.532 | neutral | None | None | None | None | I |
D/Q | 0.2211 | likely_benign | 0.2839 | benign | -0.524 | Destabilizing | 0.157 | N | 0.483 | neutral | None | None | None | None | I |
D/R | 0.3315 | likely_benign | 0.4139 | ambiguous | -0.189 | Destabilizing | 0.396 | N | 0.563 | neutral | None | None | None | None | I |
D/S | 0.0817 | likely_benign | 0.0969 | benign | -0.791 | Destabilizing | 0.005 | N | 0.179 | neutral | None | None | None | None | I |
D/T | 0.1153 | likely_benign | 0.1425 | benign | -0.6 | Destabilizing | 0.157 | N | 0.472 | neutral | None | None | None | None | I |
D/V | 0.1492 | likely_benign | 0.189 | benign | -0.031 | Destabilizing | 0.497 | N | 0.547 | neutral | N | 0.437769934 | None | None | I |
D/W | 0.8157 | likely_pathogenic | 0.864 | pathogenic | -0.187 | Destabilizing | 0.968 | D | 0.767 | deleterious | None | None | None | None | I |
D/Y | 0.1867 | likely_benign | 0.237 | benign | -0.119 | Destabilizing | 0.859 | D | 0.657 | neutral | N | 0.496607594 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.