Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24160 | 72703;72704;72705 | chr2:178573654;178573653;178573652 | chr2:179438381;179438380;179438379 |
N2AB | 22519 | 67780;67781;67782 | chr2:178573654;178573653;178573652 | chr2:179438381;179438380;179438379 |
N2A | 21592 | 64999;65000;65001 | chr2:178573654;178573653;178573652 | chr2:179438381;179438380;179438379 |
N2B | 15095 | 45508;45509;45510 | chr2:178573654;178573653;178573652 | chr2:179438381;179438380;179438379 |
Novex-1 | 15220 | 45883;45884;45885 | chr2:178573654;178573653;178573652 | chr2:179438381;179438380;179438379 |
Novex-2 | 15287 | 46084;46085;46086 | chr2:178573654;178573653;178573652 | chr2:179438381;179438380;179438379 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.009 | N | 0.352 | 0.24 | 0.358540694251 | gnomAD-4.0.0 | 1.88852E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.29086E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.821 | likely_pathogenic | 0.8671 | pathogenic | -2.419 | Highly Destabilizing | 0.104 | N | 0.575 | neutral | D | 0.534400142 | None | None | N |
V/C | 0.9315 | likely_pathogenic | 0.9441 | pathogenic | -2.16 | Highly Destabilizing | 0.968 | D | 0.773 | deleterious | None | None | None | None | N |
V/D | 0.9984 | likely_pathogenic | 0.9986 | pathogenic | -3.414 | Highly Destabilizing | 0.726 | D | 0.895 | deleterious | None | None | None | None | N |
V/E | 0.9937 | likely_pathogenic | 0.9947 | pathogenic | -3.101 | Highly Destabilizing | 0.667 | D | 0.864 | deleterious | D | 0.558037805 | None | None | N |
V/F | 0.8093 | likely_pathogenic | 0.8507 | pathogenic | -1.37 | Destabilizing | 0.567 | D | 0.757 | deleterious | None | None | None | None | N |
V/G | 0.9467 | likely_pathogenic | 0.9577 | pathogenic | -3.053 | Highly Destabilizing | 0.667 | D | 0.881 | deleterious | D | 0.558037805 | None | None | N |
V/H | 0.9971 | likely_pathogenic | 0.9978 | pathogenic | -2.898 | Highly Destabilizing | 0.968 | D | 0.882 | deleterious | None | None | None | None | N |
V/I | 0.0639 | likely_benign | 0.067 | benign | -0.59 | Destabilizing | None | N | 0.183 | neutral | N | 0.438639512 | None | None | N |
V/K | 0.9954 | likely_pathogenic | 0.9961 | pathogenic | -2.103 | Highly Destabilizing | 0.726 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.3206 | likely_benign | 0.3914 | ambiguous | -0.59 | Destabilizing | 0.009 | N | 0.352 | neutral | N | 0.4972106 | None | None | N |
V/M | 0.5884 | likely_pathogenic | 0.6699 | pathogenic | -0.889 | Destabilizing | 0.567 | D | 0.643 | neutral | None | None | None | None | N |
V/N | 0.9936 | likely_pathogenic | 0.995 | pathogenic | -2.744 | Highly Destabilizing | 0.89 | D | 0.907 | deleterious | None | None | None | None | N |
V/P | 0.9909 | likely_pathogenic | 0.9917 | pathogenic | -1.178 | Destabilizing | 0.89 | D | 0.868 | deleterious | None | None | None | None | N |
V/Q | 0.9912 | likely_pathogenic | 0.9932 | pathogenic | -2.416 | Highly Destabilizing | 0.89 | D | 0.889 | deleterious | None | None | None | None | N |
V/R | 0.9905 | likely_pathogenic | 0.992 | pathogenic | -2.112 | Highly Destabilizing | 0.726 | D | 0.902 | deleterious | None | None | None | None | N |
V/S | 0.9666 | likely_pathogenic | 0.9756 | pathogenic | -3.339 | Highly Destabilizing | 0.726 | D | 0.81 | deleterious | None | None | None | None | N |
V/T | 0.8876 | likely_pathogenic | 0.9142 | pathogenic | -2.857 | Highly Destabilizing | 0.272 | N | 0.591 | neutral | None | None | None | None | N |
V/W | 0.996 | likely_pathogenic | 0.997 | pathogenic | -1.963 | Destabilizing | 0.968 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.9852 | likely_pathogenic | 0.9888 | pathogenic | -1.614 | Destabilizing | 0.726 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.