Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24169 | 72730;72731;72732 | chr2:178573627;178573626;178573625 | chr2:179438354;179438353;179438352 |
N2AB | 22528 | 67807;67808;67809 | chr2:178573627;178573626;178573625 | chr2:179438354;179438353;179438352 |
N2A | 21601 | 65026;65027;65028 | chr2:178573627;178573626;178573625 | chr2:179438354;179438353;179438352 |
N2B | 15104 | 45535;45536;45537 | chr2:178573627;178573626;178573625 | chr2:179438354;179438353;179438352 |
Novex-1 | 15229 | 45910;45911;45912 | chr2:178573627;178573626;178573625 | chr2:179438354;179438353;179438352 |
Novex-2 | 15296 | 46111;46112;46113 | chr2:178573627;178573626;178573625 | chr2:179438354;179438353;179438352 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.067 | N | 0.339 | 0.127 | 0.392395365052 | gnomAD-4.0.0 | 1.94048E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.36279E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5918 | likely_pathogenic | 0.7684 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.59 | neutral | None | None | None | None | I |
A/D | 0.8758 | likely_pathogenic | 0.9497 | pathogenic | -0.522 | Destabilizing | 0.991 | D | 0.658 | neutral | None | None | None | None | I |
A/E | 0.7798 | likely_pathogenic | 0.9026 | pathogenic | -0.617 | Destabilizing | 0.988 | D | 0.563 | neutral | N | 0.469858136 | None | None | I |
A/F | 0.5932 | likely_pathogenic | 0.7198 | pathogenic | -0.854 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | I |
A/G | 0.3249 | likely_benign | 0.458 | ambiguous | -0.682 | Destabilizing | 0.958 | D | 0.457 | neutral | N | 0.475920103 | None | None | I |
A/H | 0.8134 | likely_pathogenic | 0.8981 | pathogenic | -0.696 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
A/I | 0.3576 | ambiguous | 0.4934 | ambiguous | -0.317 | Destabilizing | 0.991 | D | 0.586 | neutral | None | None | None | None | I |
A/K | 0.928 | likely_pathogenic | 0.9694 | pathogenic | -0.83 | Destabilizing | 0.991 | D | 0.569 | neutral | None | None | None | None | I |
A/L | 0.2067 | likely_benign | 0.2816 | benign | -0.317 | Destabilizing | 0.938 | D | 0.503 | neutral | None | None | None | None | I |
A/M | 0.3399 | likely_benign | 0.4675 | ambiguous | -0.388 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | I |
A/N | 0.5198 | ambiguous | 0.6693 | pathogenic | -0.464 | Destabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | I |
A/P | 0.7459 | likely_pathogenic | 0.8481 | pathogenic | -0.351 | Destabilizing | 0.994 | D | 0.564 | neutral | N | 0.515998644 | None | None | I |
A/Q | 0.6521 | likely_pathogenic | 0.7818 | pathogenic | -0.678 | Destabilizing | 0.995 | D | 0.603 | neutral | None | None | None | None | I |
A/R | 0.8592 | likely_pathogenic | 0.9212 | pathogenic | -0.41 | Destabilizing | 0.991 | D | 0.567 | neutral | None | None | None | None | I |
A/S | 0.1474 | likely_benign | 0.1858 | benign | -0.732 | Destabilizing | 0.919 | D | 0.449 | neutral | N | 0.442191532 | None | None | I |
A/T | 0.14 | likely_benign | 0.2361 | benign | -0.74 | Destabilizing | 0.067 | N | 0.339 | neutral | N | 0.428206301 | None | None | I |
A/V | 0.1664 | likely_benign | 0.2427 | benign | -0.351 | Destabilizing | 0.919 | D | 0.467 | neutral | N | 0.482502146 | None | None | I |
A/W | 0.9336 | likely_pathogenic | 0.9656 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
A/Y | 0.7829 | likely_pathogenic | 0.8809 | pathogenic | -0.707 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.