Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24183 | 72772;72773;72774 | chr2:178573585;178573584;178573583 | chr2:179438312;179438311;179438310 |
N2AB | 22542 | 67849;67850;67851 | chr2:178573585;178573584;178573583 | chr2:179438312;179438311;179438310 |
N2A | 21615 | 65068;65069;65070 | chr2:178573585;178573584;178573583 | chr2:179438312;179438311;179438310 |
N2B | 15118 | 45577;45578;45579 | chr2:178573585;178573584;178573583 | chr2:179438312;179438311;179438310 |
Novex-1 | 15243 | 45952;45953;45954 | chr2:178573585;178573584;178573583 | chr2:179438312;179438311;179438310 |
Novex-2 | 15310 | 46153;46154;46155 | chr2:178573585;178573584;178573583 | chr2:179438312;179438311;179438310 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 1.0 | N | 0.736 | 0.351 | 0.214338557667 | gnomAD-4.0.0 | 7.43133E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.45035E-07 | 0 | 0 |
K/T | None | None | 1.0 | N | 0.823 | 0.358 | 0.340753184043 | gnomAD-4.0.0 | 7.42424E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.44444E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6098 | likely_pathogenic | 0.7269 | pathogenic | -0.165 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
K/C | 0.8083 | likely_pathogenic | 0.8499 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
K/D | 0.8765 | likely_pathogenic | 0.9216 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
K/E | 0.5384 | ambiguous | 0.6873 | pathogenic | 0.111 | Stabilizing | 0.999 | D | 0.593 | neutral | N | 0.518364159 | None | None | N |
K/F | 0.9088 | likely_pathogenic | 0.9325 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
K/G | 0.7946 | likely_pathogenic | 0.8561 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
K/H | 0.4175 | ambiguous | 0.4871 | ambiguous | -0.69 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/I | 0.543 | ambiguous | 0.6267 | pathogenic | 0.566 | Stabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
K/L | 0.5791 | likely_pathogenic | 0.6605 | pathogenic | 0.566 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
K/M | 0.395 | ambiguous | 0.4915 | ambiguous | 0.227 | Stabilizing | 1.0 | D | 0.797 | deleterious | N | 0.481661906 | None | None | N |
K/N | 0.7179 | likely_pathogenic | 0.8073 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | N | 0.501914626 | None | None | N |
K/P | 0.793 | likely_pathogenic | 0.8419 | pathogenic | 0.353 | Stabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
K/Q | 0.2583 | likely_benign | 0.338 | benign | -0.263 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.50568565 | None | None | N |
K/R | 0.1021 | likely_benign | 0.1087 | benign | -0.35 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.488524041 | None | None | N |
K/S | 0.6952 | likely_pathogenic | 0.796 | pathogenic | -0.722 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
K/T | 0.2887 | likely_benign | 0.3904 | ambiguous | -0.475 | Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.440052517 | None | None | N |
K/V | 0.4851 | ambiguous | 0.5663 | pathogenic | 0.353 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
K/W | 0.8449 | likely_pathogenic | 0.8779 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
K/Y | 0.7972 | likely_pathogenic | 0.8445 | pathogenic | 0.32 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.