Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24194 | 72805;72806;72807 | chr2:178573552;178573551;178573550 | chr2:179438279;179438278;179438277 |
N2AB | 22553 | 67882;67883;67884 | chr2:178573552;178573551;178573550 | chr2:179438279;179438278;179438277 |
N2A | 21626 | 65101;65102;65103 | chr2:178573552;178573551;178573550 | chr2:179438279;179438278;179438277 |
N2B | 15129 | 45610;45611;45612 | chr2:178573552;178573551;178573550 | chr2:179438279;179438278;179438277 |
Novex-1 | 15254 | 45985;45986;45987 | chr2:178573552;178573551;178573550 | chr2:179438279;179438278;179438277 |
Novex-2 | 15321 | 46186;46187;46188 | chr2:178573552;178573551;178573550 | chr2:179438279;179438278;179438277 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs746396020 | -1.114 | 0.084 | N | 0.443 | 0.078 | 0.539835882356 | gnomAD-2.1.1 | 5.96E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.19E-05 | 0 |
I/L | rs746396020 | -1.114 | 0.084 | N | 0.443 | 0.078 | 0.539835882356 | gnomAD-4.0.0 | 1.95229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.37687E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.388 | ambiguous | 0.4898 | ambiguous | -2.755 | Highly Destabilizing | 0.404 | N | 0.629 | neutral | None | None | None | None | N |
I/C | 0.5598 | ambiguous | 0.6188 | pathogenic | -1.777 | Destabilizing | 0.973 | D | 0.694 | prob.neutral | None | None | None | None | N |
I/D | 0.7925 | likely_pathogenic | 0.8764 | pathogenic | -3.209 | Highly Destabilizing | 0.906 | D | 0.775 | deleterious | None | None | None | None | N |
I/E | 0.6193 | likely_pathogenic | 0.7395 | pathogenic | -2.952 | Highly Destabilizing | 0.906 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/F | 0.224 | likely_benign | 0.2873 | benign | -1.563 | Destabilizing | 0.826 | D | 0.63 | neutral | None | None | None | None | N |
I/G | 0.6734 | likely_pathogenic | 0.7751 | pathogenic | -3.279 | Highly Destabilizing | 0.906 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/H | 0.5109 | ambiguous | 0.6035 | pathogenic | -2.791 | Highly Destabilizing | 0.991 | D | 0.766 | deleterious | None | None | None | None | N |
I/K | 0.4432 | ambiguous | 0.5611 | ambiguous | -1.962 | Destabilizing | 0.879 | D | 0.743 | deleterious | N | 0.493447071 | None | None | N |
I/L | 0.107 | likely_benign | 0.1255 | benign | -1.2 | Destabilizing | 0.084 | N | 0.443 | neutral | N | 0.463318952 | None | None | N |
I/M | 0.1239 | likely_benign | 0.1443 | benign | -1.254 | Destabilizing | 0.782 | D | 0.655 | neutral | N | 0.466836108 | None | None | N |
I/N | 0.3175 | likely_benign | 0.4321 | ambiguous | -2.413 | Highly Destabilizing | 0.967 | D | 0.786 | deleterious | None | None | None | None | N |
I/P | 0.9729 | likely_pathogenic | 0.9806 | pathogenic | -1.707 | Destabilizing | 0.967 | D | 0.778 | deleterious | None | None | None | None | N |
I/Q | 0.423 | ambiguous | 0.5175 | ambiguous | -2.199 | Highly Destabilizing | 0.967 | D | 0.781 | deleterious | None | None | None | None | N |
I/R | 0.3526 | ambiguous | 0.4434 | ambiguous | -1.783 | Destabilizing | 0.879 | D | 0.785 | deleterious | N | 0.498642247 | None | None | N |
I/S | 0.296 | likely_benign | 0.3852 | ambiguous | -2.995 | Highly Destabilizing | 0.826 | D | 0.67 | neutral | None | None | None | None | N |
I/T | 0.2143 | likely_benign | 0.3096 | benign | -2.609 | Highly Destabilizing | 0.505 | D | 0.663 | neutral | N | 0.492868281 | None | None | N |
I/V | 0.0674 | likely_benign | 0.0773 | benign | -1.707 | Destabilizing | 0.001 | N | 0.277 | neutral | N | 0.50062376 | None | None | N |
I/W | 0.8544 | likely_pathogenic | 0.8784 | pathogenic | -1.986 | Destabilizing | 0.991 | D | 0.712 | prob.delet. | None | None | None | None | N |
I/Y | 0.5415 | ambiguous | 0.612 | pathogenic | -1.771 | Destabilizing | 0.906 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.