Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24198 | 72817;72818;72819 | chr2:178573540;178573539;178573538 | chr2:179438267;179438266;179438265 |
N2AB | 22557 | 67894;67895;67896 | chr2:178573540;178573539;178573538 | chr2:179438267;179438266;179438265 |
N2A | 21630 | 65113;65114;65115 | chr2:178573540;178573539;178573538 | chr2:179438267;179438266;179438265 |
N2B | 15133 | 45622;45623;45624 | chr2:178573540;178573539;178573538 | chr2:179438267;179438266;179438265 |
Novex-1 | 15258 | 45997;45998;45999 | chr2:178573540;178573539;178573538 | chr2:179438267;179438266;179438265 |
Novex-2 | 15325 | 46198;46199;46200 | chr2:178573540;178573539;178573538 | chr2:179438267;179438266;179438265 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | None | None | 0.684 | N | 0.653 | 0.39 | 0.599012661586 | gnomAD-4.0.0 | 1.95311E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.37703E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.4135 | ambiguous | 0.4699 | ambiguous | -2.652 | Highly Destabilizing | 0.373 | N | 0.665 | neutral | None | None | None | None | N |
M/C | 0.6398 | likely_pathogenic | 0.6822 | pathogenic | -2.34 | Highly Destabilizing | 0.996 | D | 0.653 | neutral | None | None | None | None | N |
M/D | 0.9323 | likely_pathogenic | 0.9441 | pathogenic | -2.344 | Highly Destabilizing | 0.91 | D | 0.681 | prob.neutral | None | None | None | None | N |
M/E | 0.6583 | likely_pathogenic | 0.6591 | pathogenic | -2.188 | Highly Destabilizing | 0.59 | D | 0.631 | neutral | None | None | None | None | N |
M/F | 0.4708 | ambiguous | 0.526 | ambiguous | -1.111 | Destabilizing | 0.984 | D | 0.691 | prob.neutral | None | None | None | None | N |
M/G | 0.7374 | likely_pathogenic | 0.7648 | pathogenic | -3.053 | Highly Destabilizing | 0.742 | D | 0.644 | neutral | None | None | None | None | N |
M/H | 0.7061 | likely_pathogenic | 0.7469 | pathogenic | -2.434 | Highly Destabilizing | 0.987 | D | 0.651 | neutral | None | None | None | None | N |
M/I | 0.5231 | ambiguous | 0.5598 | ambiguous | -1.51 | Destabilizing | 0.815 | D | 0.735 | prob.delet. | N | 0.489753405 | None | None | N |
M/K | 0.4396 | ambiguous | 0.4573 | ambiguous | -1.844 | Destabilizing | 0.007 | N | 0.428 | neutral | N | 0.47372516 | None | None | N |
M/L | 0.2037 | likely_benign | 0.2055 | benign | -1.51 | Destabilizing | 0.281 | N | 0.529 | neutral | N | 0.484462229 | None | None | N |
M/N | 0.6489 | likely_pathogenic | 0.6965 | pathogenic | -1.955 | Destabilizing | 0.91 | D | 0.647 | neutral | None | None | None | None | N |
M/P | 0.9936 | likely_pathogenic | 0.9948 | pathogenic | -1.874 | Destabilizing | 0.953 | D | 0.643 | neutral | None | None | None | None | N |
M/Q | 0.3591 | ambiguous | 0.3633 | ambiguous | -1.82 | Destabilizing | 0.742 | D | 0.687 | prob.neutral | None | None | None | None | N |
M/R | 0.4243 | ambiguous | 0.4442 | ambiguous | -1.605 | Destabilizing | 0.521 | D | 0.649 | neutral | N | 0.405134653 | None | None | N |
M/S | 0.3546 | ambiguous | 0.4071 | ambiguous | -2.528 | Highly Destabilizing | 0.742 | D | 0.658 | neutral | None | None | None | None | N |
M/T | 0.1868 | likely_benign | 0.2158 | benign | -2.273 | Highly Destabilizing | 0.684 | D | 0.653 | neutral | N | 0.469666135 | None | None | N |
M/V | 0.1477 | likely_benign | 0.1552 | benign | -1.874 | Destabilizing | 0.472 | N | 0.751 | deleterious | N | 0.47522667 | None | None | N |
M/W | 0.8349 | likely_pathogenic | 0.8595 | pathogenic | -1.327 | Destabilizing | 0.996 | D | 0.656 | neutral | None | None | None | None | N |
M/Y | 0.7556 | likely_pathogenic | 0.7972 | pathogenic | -1.409 | Destabilizing | 0.984 | D | 0.666 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.