Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24214 | 72865;72866;72867 | chr2:178573492;178573491;178573490 | chr2:179438219;179438218;179438217 |
N2AB | 22573 | 67942;67943;67944 | chr2:178573492;178573491;178573490 | chr2:179438219;179438218;179438217 |
N2A | 21646 | 65161;65162;65163 | chr2:178573492;178573491;178573490 | chr2:179438219;179438218;179438217 |
N2B | 15149 | 45670;45671;45672 | chr2:178573492;178573491;178573490 | chr2:179438219;179438218;179438217 |
Novex-1 | 15274 | 46045;46046;46047 | chr2:178573492;178573491;178573490 | chr2:179438219;179438218;179438217 |
Novex-2 | 15341 | 46246;46247;46248 | chr2:178573492;178573491;178573490 | chr2:179438219;179438218;179438217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.002 | N | 0.331 | 0.125 | 0.322786055943 | gnomAD-4.0.0 | 7.406E-07 | None | None | None | None | N | None | 3.34986E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2136 | likely_benign | 0.2686 | benign | -1.492 | Destabilizing | 0.001 | N | 0.174 | neutral | N | 0.483268068 | None | None | N |
V/C | 0.563 | ambiguous | 0.6418 | pathogenic | -0.977 | Destabilizing | 0.869 | D | 0.539 | neutral | None | None | None | None | N |
V/D | 0.6802 | likely_pathogenic | 0.7469 | pathogenic | -1.433 | Destabilizing | 0.221 | N | 0.696 | prob.delet. | None | None | None | None | N |
V/E | 0.468 | ambiguous | 0.5202 | ambiguous | -1.346 | Destabilizing | 0.058 | N | 0.563 | neutral | N | 0.468570854 | None | None | N |
V/F | 0.1669 | likely_benign | 0.2187 | benign | -0.912 | Destabilizing | 0.221 | N | 0.587 | neutral | None | None | None | None | N |
V/G | 0.3309 | likely_benign | 0.4169 | ambiguous | -1.891 | Destabilizing | 0.03 | N | 0.634 | neutral | N | 0.514503055 | None | None | N |
V/H | 0.6159 | likely_pathogenic | 0.7012 | pathogenic | -1.387 | Destabilizing | 0.869 | D | 0.705 | prob.delet. | None | None | None | None | N |
V/I | 0.0726 | likely_benign | 0.0752 | benign | -0.461 | Destabilizing | None | N | 0.145 | neutral | None | None | None | None | N |
V/K | 0.4038 | ambiguous | 0.4989 | ambiguous | -1.351 | Destabilizing | 0.075 | N | 0.537 | neutral | None | None | None | None | N |
V/L | 0.1331 | likely_benign | 0.1845 | benign | -0.461 | Destabilizing | 0.002 | N | 0.331 | neutral | N | 0.469630357 | None | None | N |
V/M | 0.1123 | likely_benign | 0.1485 | benign | -0.393 | Destabilizing | 0.002 | N | 0.333 | neutral | N | 0.468913249 | None | None | N |
V/N | 0.4804 | ambiguous | 0.5812 | pathogenic | -1.324 | Destabilizing | 0.221 | N | 0.711 | prob.delet. | None | None | None | None | N |
V/P | 0.934 | likely_pathogenic | 0.9519 | pathogenic | -0.772 | Destabilizing | 0.366 | N | 0.581 | neutral | None | None | None | None | N |
V/Q | 0.3643 | ambiguous | 0.4514 | ambiguous | -1.351 | Destabilizing | 0.221 | N | 0.601 | neutral | None | None | None | None | N |
V/R | 0.3655 | ambiguous | 0.4642 | ambiguous | -0.947 | Destabilizing | 0.221 | N | 0.708 | prob.delet. | None | None | None | None | N |
V/S | 0.3069 | likely_benign | 0.3843 | ambiguous | -1.886 | Destabilizing | 0.039 | N | 0.539 | neutral | None | None | None | None | N |
V/T | 0.1885 | likely_benign | 0.2297 | benign | -1.672 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | N |
V/W | 0.8109 | likely_pathogenic | 0.8751 | pathogenic | -1.223 | Destabilizing | 0.869 | D | 0.739 | deleterious | None | None | None | None | N |
V/Y | 0.5343 | ambiguous | 0.6438 | pathogenic | -0.876 | Destabilizing | 0.366 | N | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.