Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24233 | 72922;72923;72924 | chr2:178573435;178573434;178573433 | chr2:179438162;179438161;179438160 |
N2AB | 22592 | 67999;68000;68001 | chr2:178573435;178573434;178573433 | chr2:179438162;179438161;179438160 |
N2A | 21665 | 65218;65219;65220 | chr2:178573435;178573434;178573433 | chr2:179438162;179438161;179438160 |
N2B | 15168 | 45727;45728;45729 | chr2:178573435;178573434;178573433 | chr2:179438162;179438161;179438160 |
Novex-1 | 15293 | 46102;46103;46104 | chr2:178573435;178573434;178573433 | chr2:179438162;179438161;179438160 |
Novex-2 | 15360 | 46303;46304;46305 | chr2:178573435;178573434;178573433 | chr2:179438162;179438161;179438160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | None | N | 0.063 | 0.183 | 0.0138822411134 | gnomAD-4.0.0 | 7.31964E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.35916E-07 | 0 | 0 |
T/S | rs768359972 | -0.393 | None | N | 0.055 | 0.162 | 0.0666544352282 | gnomAD-2.1.1 | 1.14E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.39509E-04 | None | 0 | 0 | 0 |
T/S | rs768359972 | -0.393 | None | N | 0.055 | 0.162 | 0.0666544352282 | gnomAD-4.0.0 | 3.75315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.87087E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0503 | likely_benign | 0.0499 | benign | -0.579 | Destabilizing | None | N | 0.063 | neutral | N | 0.387762401 | None | None | N |
T/C | 0.3493 | ambiguous | 0.3753 | ambiguous | -0.348 | Destabilizing | 0.676 | D | 0.369 | neutral | None | None | None | None | N |
T/D | 0.3858 | ambiguous | 0.3869 | ambiguous | 0.14 | Stabilizing | None | N | 0.143 | neutral | None | None | None | None | N |
T/E | 0.3591 | ambiguous | 0.3675 | ambiguous | 0.099 | Stabilizing | 0.016 | N | 0.306 | neutral | None | None | None | None | N |
T/F | 0.3078 | likely_benign | 0.2872 | benign | -0.844 | Destabilizing | 0.356 | N | 0.416 | neutral | None | None | None | None | N |
T/G | 0.1635 | likely_benign | 0.1647 | benign | -0.779 | Destabilizing | 0.016 | N | 0.337 | neutral | None | None | None | None | N |
T/H | 0.3259 | likely_benign | 0.3208 | benign | -1.065 | Destabilizing | 0.356 | N | 0.401 | neutral | None | None | None | None | N |
T/I | 0.2209 | likely_benign | 0.1954 | benign | -0.158 | Destabilizing | 0.055 | N | 0.404 | neutral | N | 0.50718716 | None | None | N |
T/K | 0.3646 | ambiguous | 0.3558 | ambiguous | -0.502 | Destabilizing | 0.038 | N | 0.336 | neutral | None | None | None | None | N |
T/L | 0.106 | likely_benign | 0.0986 | benign | -0.158 | Destabilizing | 0.038 | N | 0.304 | neutral | None | None | None | None | N |
T/M | 0.0923 | likely_benign | 0.0844 | benign | 0.081 | Stabilizing | 0.356 | N | 0.368 | neutral | None | None | None | None | N |
T/N | 0.1048 | likely_benign | 0.1019 | benign | -0.344 | Destabilizing | None | N | 0.197 | neutral | N | 0.369907359 | None | None | N |
T/P | 0.5257 | ambiguous | 0.4912 | ambiguous | -0.267 | Destabilizing | 0.055 | N | 0.407 | neutral | N | 0.516748005 | None | None | N |
T/Q | 0.2875 | likely_benign | 0.2833 | benign | -0.553 | Destabilizing | 0.214 | N | 0.405 | neutral | None | None | None | None | N |
T/R | 0.3345 | likely_benign | 0.3178 | benign | -0.244 | Destabilizing | 0.072 | N | 0.405 | neutral | None | None | None | None | N |
T/S | 0.0857 | likely_benign | 0.0861 | benign | -0.621 | Destabilizing | None | N | 0.055 | neutral | N | 0.385703531 | None | None | N |
T/V | 0.1348 | likely_benign | 0.1219 | benign | -0.267 | Destabilizing | 0.038 | N | 0.22 | neutral | None | None | None | None | N |
T/W | 0.7266 | likely_pathogenic | 0.7154 | pathogenic | -0.786 | Destabilizing | 0.864 | D | 0.447 | neutral | None | None | None | None | N |
T/Y | 0.3414 | ambiguous | 0.3247 | benign | -0.536 | Destabilizing | 0.356 | N | 0.412 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.