Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24247 | 72964;72965;72966 | chr2:178573393;178573392;178573391 | chr2:179438120;179438119;179438118 |
N2AB | 22606 | 68041;68042;68043 | chr2:178573393;178573392;178573391 | chr2:179438120;179438119;179438118 |
N2A | 21679 | 65260;65261;65262 | chr2:178573393;178573392;178573391 | chr2:179438120;179438119;179438118 |
N2B | 15182 | 45769;45770;45771 | chr2:178573393;178573392;178573391 | chr2:179438120;179438119;179438118 |
Novex-1 | 15307 | 46144;46145;46146 | chr2:178573393;178573392;178573391 | chr2:179438120;179438119;179438118 |
Novex-2 | 15374 | 46345;46346;46347 | chr2:178573393;178573392;178573391 | chr2:179438120;179438119;179438118 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1408225629 | None | 0.822 | N | 0.429 | 0.202 | 0.297718772494 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/G | rs1408225629 | None | 0.822 | N | 0.429 | 0.202 | 0.297718772494 | gnomAD-4.0.0 | 2.89349E-06 | None | None | None | None | I | None | 0 | 4.44622E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0905 | likely_benign | 0.0821 | benign | -0.063 | Destabilizing | 0.698 | D | 0.457 | neutral | N | 0.402019777 | None | None | I |
D/C | 0.441 | ambiguous | 0.3896 | ambiguous | 0.235 | Stabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | I |
D/E | 0.0944 | likely_benign | 0.0871 | benign | -0.193 | Destabilizing | 0.006 | N | 0.08 | neutral | N | 0.371062152 | None | None | I |
D/F | 0.4297 | ambiguous | 0.372 | ambiguous | -0.232 | Destabilizing | 0.993 | D | 0.534 | neutral | None | None | None | None | I |
D/G | 0.1345 | likely_benign | 0.1137 | benign | -0.2 | Destabilizing | 0.822 | D | 0.429 | neutral | N | 0.487254605 | None | None | I |
D/H | 0.1863 | likely_benign | 0.1722 | benign | 0.032 | Stabilizing | 0.97 | D | 0.424 | neutral | N | 0.484291657 | None | None | I |
D/I | 0.169 | likely_benign | 0.1447 | benign | 0.23 | Stabilizing | 0.978 | D | 0.547 | neutral | None | None | None | None | I |
D/K | 0.1882 | likely_benign | 0.1709 | benign | 0.554 | Stabilizing | 0.019 | N | 0.207 | neutral | None | None | None | None | I |
D/L | 0.204 | likely_benign | 0.1856 | benign | 0.23 | Stabilizing | 0.956 | D | 0.471 | neutral | None | None | None | None | I |
D/M | 0.3708 | ambiguous | 0.3267 | benign | 0.311 | Stabilizing | 0.998 | D | 0.53 | neutral | None | None | None | None | I |
D/N | 0.0807 | likely_benign | 0.0748 | benign | 0.421 | Stabilizing | 0.822 | D | 0.503 | neutral | N | 0.479635199 | None | None | I |
D/P | 0.5148 | ambiguous | 0.4169 | ambiguous | 0.153 | Stabilizing | 0.978 | D | 0.393 | neutral | None | None | None | None | I |
D/Q | 0.1846 | likely_benign | 0.1664 | benign | 0.407 | Stabilizing | 0.754 | D | 0.447 | neutral | None | None | None | None | I |
D/R | 0.243 | likely_benign | 0.2137 | benign | 0.629 | Stabilizing | 0.915 | D | 0.466 | neutral | None | None | None | None | I |
D/S | 0.0838 | likely_benign | 0.0754 | benign | 0.309 | Stabilizing | 0.86 | D | 0.446 | neutral | None | None | None | None | I |
D/T | 0.1324 | likely_benign | 0.1189 | benign | 0.41 | Stabilizing | 0.86 | D | 0.445 | neutral | None | None | None | None | I |
D/V | 0.1022 | likely_benign | 0.0915 | benign | 0.153 | Stabilizing | 0.942 | D | 0.471 | neutral | N | 0.453584748 | None | None | I |
D/W | 0.8109 | likely_pathogenic | 0.7803 | pathogenic | -0.192 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | I |
D/Y | 0.1874 | likely_benign | 0.1682 | benign | -0.005 | Destabilizing | 0.99 | D | 0.533 | neutral | N | 0.47106607 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.